Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rpic12D_2047 |
Symbol | |
ID | 8019708 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia pickettii 12D |
Kingdom | Bacteria |
Replicon accession | NC_012856 |
Strand | - |
Start bp | 2181379 |
End bp | 2183739 |
Gene Length | 2361 bp |
Protein Length | 786 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 644830833 |
Product | UvrD/REP helicase |
Protein accession | YP_002981998 |
Protein GI | 241663638 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0210] Superfamily I DNA and RNA helicases |
TIGRFAM ID | [TIGR01075] DNA helicase II |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 25 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCTGACC TGCTCGCCAA TCTGAACCCC GAACAACGCG CTGCCATCAC GCTTCCCGAT GAATCGGCGC TGATCCTGGC GGGGGCGGGC AGCGGCAAGA CGCGCGTGTT GACCACCCGC ATCGCGTGGC TGATTCAAAG TGCGCGGGTG TCACCGTCGG GTGTGCTGGC CGTCACGTTT ACGAACAAGG CAGCCAAGGA AATGACGGCC CGCCTGCAGG CCATGCTGCC GATCAACACG CGCGCCATGT GGATCGGCAC CTTCCACGGC CTGTGCAACC GGTTGCTGCG CGCGCATTTC CGCGACGCTG GTTTGCCGCA GACGTTCCAG ATTCTGGATA CGCAAGATCA GCTGTCCGCC GTCAAACGCC TGCTCAAGTC GCTCAATATC GACGACGAGA AATACCCGCC CAAGAACGTC CAGTACTTCA TCAACGGGGC CAAGGAGCAG GGCCTGCGCG CGGGCGATCT GGAAATCGCC AACGAATACG ACCGCCGCAT GGCCGACCTC TACGCCGCTT ACGACGCGCA ATGCCAGCGC GAAGGCGTGG TCGATTTTGC CGAGCTGCTG CTCCGCTGCT ACGAACTGCT GCGCTACAAC GACGCCATCC GTGCGCACTA TCAACGGCGT TTCAAGCACA TCCTGGTGGA CGAGTTCCAG GATACGAACA AGCTGCAATA CGCCTGGCTG AAGATCCTCG CCGGGCTGGG CGAGCCTGGT GTCACGCCCA ACGCCATCTT CGCCGTGGGC GACGATGACC AGAGCATCTA CGCGTTTCGT GGCGCCAACG TAGGCAACAT GGTCGACTTT GAGCGCGAAT TCCGCGTCGA GCACCGGATC AAGCTGGAGC AGAACTACCG CTCGCACGGC CATATCCTGG ATACCGCCAA CCACCTGATC TCGCACAACA CGCGTCGTCT GGGCAAGAAC CTGCGCACCG ACGCCGGCCA TGGCGAGCCG GTGCGCGTCT ACCAGGCCGC GACGGATGGG CAGGAAGCCG GCTGGATTGT CGATGAGATC CGCGACCGGA TTGCCACCGG CATGTCGCGC TCGGAAATCG CCATCCTGTA TCGCAGCAAC GCGCAGTCGC GGGTGATCGA GCATGCCCTG TTCTCGGCCG GCATCCCGTA CAAGGTGTAC GGCGGCCTGC GCTTTTTTGA GCGCGCGGAA ATCAAGCATG CGCTGGCGTA TCTTCAGCTT CTTGAGAATC CCGACAATGA CGCGGCCTTT GGTCGCGTGG TGAATTTCCC GGCGCGTGGC GTCGGGGCGC GCTCGCTGGA GCAGCTGCAG GATGCGGCGC GGCTCTATGG CATTTCGCTC GCGGCGGCGG TGCCGTATCT GACGGGGGCG GCGGGCACCA AGTTGTCGGC GTTTGTGCGT CTGATCGAAC AGATGCGTGC GGACACGCGT CAGATGACGC TGCCTGAAAT CGTGCAGCAC GTCATTCACG CCAGCGGCTT GATCACGCAT TACCAGGGCG AGAAGGAAGG TCAGGACCGC ATCGAGAACT TGCAGGAACT CGTGACCGCG GCCCAAGCCT TCGTTGCCGA AGAGGGCTAT GGCGTCGACG CGATTGCGAC CGCGCTGCCC GTGCGCCACG ACGCCATGCT GCGCATCGAA GGCGGGGAGA CCGATACCGC TTCTGAACTG GTGACCGACG AGACGCCCGC GGAGATGACA CCGCTCGTGG CTTTCCTCAC GCATGCCTCC CTGGAAGCTG GCGATAACCA GGCTCAGGCC GGCCAGGATG CCGTGCAGAT GATGACCGTG CATGCGGCCA AGGGGCTGGA ATTCCACGTC GTCTTCATCA CCGGGCTCGA AGAGGGCTTG TTCCCGCACG AAAACAGCCA GATGGAGAAG GACGGCCTTG AGGAAGAGCG CCGCCTGATG TACGTGGCGA TCACGCGTGC GCGTGAGCGG TTGTATCTGT CGTTCGCGCA AAGCCGCGTG CTGCATGGTC AGATCCGCTA CCACATCCGC TCACGCTTCT TTGATGAACT GCCTGAAGAC ACATTGAAGT GGCTGACGCC GCAGCACGCC GGCTACCAGG CGACGCGCCG TGTGCAAGGC GATACCGCAT GGGGCAAGGA TTGGTTCAAG CGCCCAGAGC GTGGCGACGA CGATGCCTAC ACCGGCCGCC CGACTGGCGG CATGGACACC GGCAAGAACT ACGCCGATGC CAAGCGCGCA GAGGCCACCG GCTTCCGGGT CGGCCAGTCG GTGTTCCACA ACAAGTTCGG GGAAGGCGTT ATCACGACGC TGGAAGGCGA GGGCGCCGAG GCGCGTGCCC AGATCAAGTT CAACCGCCAC GGGGTGAAGA CGCTGGCGTT GGGTATCGCC AAGCTCGACC CGATCAACTG A
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Protein sequence | MSDLLANLNP EQRAAITLPD ESALILAGAG SGKTRVLTTR IAWLIQSARV SPSGVLAVTF TNKAAKEMTA RLQAMLPINT RAMWIGTFHG LCNRLLRAHF RDAGLPQTFQ ILDTQDQLSA VKRLLKSLNI DDEKYPPKNV QYFINGAKEQ GLRAGDLEIA NEYDRRMADL YAAYDAQCQR EGVVDFAELL LRCYELLRYN DAIRAHYQRR FKHILVDEFQ DTNKLQYAWL KILAGLGEPG VTPNAIFAVG DDDQSIYAFR GANVGNMVDF EREFRVEHRI KLEQNYRSHG HILDTANHLI SHNTRRLGKN LRTDAGHGEP VRVYQAATDG QEAGWIVDEI RDRIATGMSR SEIAILYRSN AQSRVIEHAL FSAGIPYKVY GGLRFFERAE IKHALAYLQL LENPDNDAAF GRVVNFPARG VGARSLEQLQ DAARLYGISL AAAVPYLTGA AGTKLSAFVR LIEQMRADTR QMTLPEIVQH VIHASGLITH YQGEKEGQDR IENLQELVTA AQAFVAEEGY GVDAIATALP VRHDAMLRIE GGETDTASEL VTDETPAEMT PLVAFLTHAS LEAGDNQAQA GQDAVQMMTV HAAKGLEFHV VFITGLEEGL FPHENSQMEK DGLEEERRLM YVAITRARER LYLSFAQSRV LHGQIRYHIR SRFFDELPED TLKWLTPQHA GYQATRRVQG DTAWGKDWFK RPERGDDDAY TGRPTGGMDT GKNYADAKRA EATGFRVGQS VFHNKFGEGV ITTLEGEGAE ARAQIKFNRH GVKTLALGIA KLDPIN
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