| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpic12D_2045 |
|---|
| Symbol | |
|---|
| ID | 8019706 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Ralstonia pickettii 12D |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012856 |
|---|
| Strand | + |
|---|
| Start bp | 2179562 |
|---|
| End bp | 2180566 |
|---|
| Gene Length | 1005 bp |
|---|
| Protein Length | 334 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 644830831 |
|---|
| Product | homoserine kinase |
|---|
| Protein accession | YP_002981996 |
|---|
| Protein GI | 241663636 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG2334] Putative homoserine kinase type II (protein kinase fold) |
|---|
| TIGRFAM ID | [TIGR00938] homoserine kinase, Neisseria type |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 12 |
|---|
| Plasmid unclonability p-value | 0.674394 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 24 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCTGTTT TCACCCCGGT CTCCGACGCC GAGATCGCTC TCTGGCTGGA TCAATACGAT
GTGGGCGCCG TGCGCGCATT TCGCGGCATC CCCTCCGGGA TCGAAAACTC CAATTTCTTC
TTGACCACGG AAAAGGATGG GCAGACGCAC GACTACGTGG TCACGCTGTT CGAGCGGCTG
ACGCTAGAGC AACTGCCGTT CTACCTGTAT CTGATGCAGC ATCTGGCGCA GCACGACATC
AGCGTGCCTG CACCGATTGC CGGCCGCGAC GGCGAAATCC TGCGCACGCT CAACGGCAAG
CCGGCGACCA TCGTCACGCG TCTGGCGGGC CGCTCGAACC TGGCGCCCAC GGTGTCGGAA
TGCAGCATCG TCGGCGACAT GCTCGCCCGC ATGCACCTGG CCGGACGCGA CTATCCGCGC
CATCAGCCAA ATCTGCGCAG CCTCCCGTGG TGGAACGAAG TCGTGCCCGA TGTCGCTCCG
TTCGTGCACG GCGACACGCG CGCGCTGCTC GAAAACGAAC TCGCGCACCA GCAACGTTTC
TTTGCCAGCG CCGACTACGC TGCGCTGCCC GAAGGCCCGT GCCATTGCGA CCTCTTCCGC
GACAACGTGC TGTTCGAGCC AGCCACCGCC GGCCAGCCGG AACGCCTCGG CGGCTTCTTC
GACTTTTACT TTGCCGGTGT CGACAAGTGG CTCTTCGACG TGGCTGTCAC CGTCAACGAC
TGGTGCATCG ACCTGGCTAC AGGCGTGCTG GATGCCGAGC GGGCACGTGC GATGCTCAGC
GCGTATCACG CTGTACGCCC GTTTACCGAC ACGGAAGCGC GGCACTGGCA AGACATGCTG
CGTGCCGCGG CGTACCGCTT CTGGGTCTCT CGCCTGTGGG ATTTCTATCT CCCGCGCGAT
GCCGAACTGC TCAAGCCGCA TGACCCCACC CACTTCGAGC GCGTGCTGCG CGCGCGGGTT
GGCGCGAGTG GCCTGACTCT GGATCTTCCC CAACCATGCA ACTGA
|
|---|
| Protein sequence | MAVFTPVSDA EIALWLDQYD VGAVRAFRGI PSGIENSNFF LTTEKDGQTH DYVVTLFERL
TLEQLPFYLY LMQHLAQHDI SVPAPIAGRD GEILRTLNGK PATIVTRLAG RSNLAPTVSE
CSIVGDMLAR MHLAGRDYPR HQPNLRSLPW WNEVVPDVAP FVHGDTRALL ENELAHQQRF
FASADYAALP EGPCHCDLFR DNVLFEPATA GQPERLGGFF DFYFAGVDKW LFDVAVTVND
WCIDLATGVL DAERARAMLS AYHAVRPFTD TEARHWQDML RAAAYRFWVS RLWDFYLPRD
AELLKPHDPT HFERVLRARV GASGLTLDLP QPCN
|
|---|
| |