Gene Rpic12D_2043 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic12D_2043 
Symbol 
ID8019704 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12D 
KingdomBacteria 
Replicon accessionNC_012856 
Strand
Start bp2177994 
End bp2178947 
Gene Length954 bp 
Protein Length317 aa 
Translation table11 
GC content61% 
IMG OID644830829 
Producthypothetical protein 
Protein accessionYP_002981994 
Protein GI241663634 
COG category[R] General function prediction only 
COG ID[COG1611] Predicted Rossmann fold nucleotide-binding protein 
TIGRFAM ID[TIGR00725] conserved hypothetical protein, DprA/Smf-related, family 1
[TIGR00730] conserved hypothetical protein, DprA/Smf-related, family 2 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGACTCTA AAGTGACTGG AACGCCAAAA GGCGTTTCCG ATAATGGCGC TTCCGCTGAA 
GGCGGCGTGG CAAAGCAGGC TGCCGGTGCT TCCGCGTCGG AGGTTTCGGC GACAGAACTG
ACCGGGGTGA GCCCCTCGCG CCAAGCCACC ACGGCCGACA TGGATGTCAA CGTGACGGTG
GGCGTCGAAC ACGAGCCCAA AGCGGACCTG GCACATGGCC GTACCGATCG CAAGATGATC
CCCAGCCTGC GGGCACTCGC CGACGAAGAA CGCGCCACCG CAAAGAAAGC GCGCGCCTCC
TGGCAGATGT TCACGATTAT GGCAGAGTTC ATCGAGGCGA CCGAGTACCT CTCGGAGATC
CGTCCGGCCG TCTCGATCTA CGGCAGCGCG CGTCTGCGCG AGGATTCGCC GTACTACGAA
CGCACCATCG AAATCGCTCG GCTGTTCTCG GATGCGGGCT TCGCCGTCAT CTCCGGTGGG
GGCCCCGGCA TCATGGAAGC GGCCAACAAA GGCGCGCACG CGGGTAAGTC GGCCAGCGTC
GGTCTGAACA TCGAACTGCC GCACGAACAG CAGGGCAATC GATACCAGGA CATTTCGATG
CGCTTCCGCC ATTTCTTCAC GCGCAAGGTC ACTTTCGTGA AGAATTCGGA CGCGTTCATC
GTCATGCCTG GTGGTTTCGG CACGCTCGAT GAACTGGCTG AAGTGCTCAC GCTCGTCCAG
ACGGGCAAAT CGCGCAGTGT GCCGGTGATC ATGTTCGGCA GCCACTTCTG GAAGGGTCTG
CTGGACTGGT TCCGCTTTAC GTTGCTGCCG ATGGGTCTGA TCGCCGAGCA CGACCTCGAC
ATCATGCGCA TCGTCGACGA ACCCAAGGAT GCGCTTGATG CCGTCTACGA GTTCTACGAA
AAGCGCGAAG GCACCTCGCC GATTCCGCCC AAGGAAGAGA TGTTCTATCT GTAA
 
Protein sequence
MDSKVTGTPK GVSDNGASAE GGVAKQAAGA SASEVSATEL TGVSPSRQAT TADMDVNVTV 
GVEHEPKADL AHGRTDRKMI PSLRALADEE RATAKKARAS WQMFTIMAEF IEATEYLSEI
RPAVSIYGSA RLREDSPYYE RTIEIARLFS DAGFAVISGG GPGIMEAANK GAHAGKSASV
GLNIELPHEQ QGNRYQDISM RFRHFFTRKV TFVKNSDAFI VMPGGFGTLD ELAEVLTLVQ
TGKSRSVPVI MFGSHFWKGL LDWFRFTLLP MGLIAEHDLD IMRIVDEPKD ALDAVYEFYE
KREGTSPIPP KEEMFYL