Gene Rpic12D_2041 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic12D_2041 
Symbol 
ID8019702 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12D 
KingdomBacteria 
Replicon accessionNC_012856 
Strand
Start bp2173634 
End bp2174968 
Gene Length1335 bp 
Protein Length444 aa 
Translation table11 
GC content66% 
IMG OID644830827 
ProductFAD-dependent pyridine nucleotide-disulphide oxidoreductase 
Protein accessionYP_002981992 
Protein GI241663632 
COG category[C] Energy production and conversion 
COG ID[COG1252] NADH dehydrogenase, FAD-containing subunit 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0563919 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGTAGGGC AGACGGATGG CGCAGGCGGG GCGGGCGGGC GGCGTATTGT GGTGGTCGGC 
GGGGGCGCAG GCGGGTTGGA GCTTGCGACG CGCCTGGGCG ACAAGCTGGG CAAGCGCGGT
GCCGCCCAGG TCATTCTGGT CGACCGCAAC CCCACACACA TCTGGAAACC ACTGCTGCAT
GAAGTCGCTG CCGGCAGCAT GGATCCGAAC ACGCATCAGC TCGAATACGC TGCGCAGGCG
CGCTGGCACG GCTTCGAATT CCAGCAGGGC GAACTGAAGG GCCTCGATCG CGTCACCAAA
TCCATCATCG TGTCCGGATG CGTTGATGCC GACGGCACCG AGGTGCTGCC GGAGCGTGCC
ATTTCGTACG ACACGCTGGT GCTGTCCATC GGCAGCGTGA CGCATTTCTT TGGTGTGCCG
GGCACGGCCG AGCATGCCAT CGCGCTCGAC ACCGCATGGC AGGCCGAGCG CTTTCGCCGC
AAGCTCATCG CGGCATGCAT GCGCGCGCAG AACGGTGTGG GCGATGCGCG TCCGCAGGTC
GACATCGCCA TTGTCGGTGC GGGAGCCACG GGCGTGGAGC TGTCGGCCGA ACTGCGCAAC
ACCGCCCACG TGCTGGCCGC TTATGGGCTG CACAAGCTGG ACCCGCGCCA CGACATTCGC
ATCCATCTGA TCGAAGGCGG TCCGCGGATT CTGCCGGTGC TCAAGGAGCG CATTTCGGCG
GCGACCACCG AGCTGCTGCA CAAGCTCGAC GTGGACGTCA TCACCAGTGA ACGTGTGACG
GAAGTGACCG CCAGCGCCGT CAACACGGCC AGCGGCAAAT CCATTCCGGC AGATCTGACC
GTGTGGGCCG CGGGCATCCG TGCACCGTCC GTGCTGGGCG AGCTGGGGCT GCCGGTGAAC
AAGCTGGGGC AGGTGATCGT CTCGCGCACG CTGCAGGTGG AGGGTGACGA TTCAATCTAC
GCCTTTGGCG ATTGCGCGAG CTGCCCCTGG CCCGAGGCGT CGACCAGCGT GCCGCCGCGG
GCGCAGGCGG CACATCAGCA GGCCACCTAT CTGTTCGATG CGTTGCGCAA GCGCATGGAG
GGCAAGCCAG TCCAGCCGTT CGCGTTCAAG GATCTCGGCT CGCTGGTGTC GCTTGGCCAT
TTCAGTGCGG TCGGCAGCCT GATGGGCGGG CTGATCGGCG GCTCGATGTT CATCGAAGGC
CTGATGGCAC GTCTGATGTA CACGTCGCTG TACCGCATGC ACGTGCTGGC GCTACACGGC
TGGGTGCGCA TGTCGGTCGA CACGGTCATG CACTGGCTGC GCAGCAAGAC GAATCCGCGC
GTCAAGCTGC ACTAG
 
Protein sequence
MVGQTDGAGG AGGRRIVVVG GGAGGLELAT RLGDKLGKRG AAQVILVDRN PTHIWKPLLH 
EVAAGSMDPN THQLEYAAQA RWHGFEFQQG ELKGLDRVTK SIIVSGCVDA DGTEVLPERA
ISYDTLVLSI GSVTHFFGVP GTAEHAIALD TAWQAERFRR KLIAACMRAQ NGVGDARPQV
DIAIVGAGAT GVELSAELRN TAHVLAAYGL HKLDPRHDIR IHLIEGGPRI LPVLKERISA
ATTELLHKLD VDVITSERVT EVTASAVNTA SGKSIPADLT VWAAGIRAPS VLGELGLPVN
KLGQVIVSRT LQVEGDDSIY AFGDCASCPW PEASTSVPPR AQAAHQQATY LFDALRKRME
GKPVQPFAFK DLGSLVSLGH FSAVGSLMGG LIGGSMFIEG LMARLMYTSL YRMHVLALHG
WVRMSVDTVM HWLRSKTNPR VKLH