Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rpic12D_2040 |
Symbol | |
ID | 8019701 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia pickettii 12D |
Kingdom | Bacteria |
Replicon accession | NC_012856 |
Strand | - |
Start bp | 2172647 |
End bp | 2173525 |
Gene Length | 879 bp |
Protein Length | 292 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 644830826 |
Product | Carboxymethylenebutenolidase |
Protein accession | YP_002981991 |
Protein GI | 241663631 |
COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
COG ID | [COG0412] Dienelactone hydrolase and related enzymes |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.143956 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 27 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCAGCTTG ATGCAGAAGT GGAGAGTCTG GTACCCGGCC GCAGCTTTGA CCGTCGCGGT TTCATGAAGA CGGCGTTGGG CTCAGCCTTT GCGGCGGCGG TGCTGCCAGT GTCGGCGCAG ACCGTCCATA CCGATTTCAA TGGGCTGACG GCCGGAGAGG TGACCGTGCC GGTGGGCGAT TTCAAGATGC CGGCCTATCG TGCCCAGCCA GAAGGCAAGA CGAAGCTGCC GGTGGTGATC GTCATCAGCG AGATCTTTGG CGTACACGAA TACATTGCCG ATATCTGCCG ACGCTTTGCC AAGCTCGGTT ATCTGGCGAT CGCGCCTGAA CTGTTTGTGC GCCAGGGCGA TCCGCGTGCT TATGGGACGG TGCAGGAAAC CGTTGCCAAC GTGGTTTCAA AGGTGCCGGA TTCCCAGGTG GCGGGCGATA TCGACGCCAC GATCGCATGG GCCACCGAGA ACGGCGGCGA CGCGGCGCGT ATCGGCATGA CCGGCTTCTG CTGGGGCGGG CGCCAAGTCT GGCTGGCTGC GGAGCGCAAC CCCGGCATCA AGGCTGCAGT AGCGTGGTAC GGGCCGCTGA AGGGCAATCC GAATCCGCTG CAACCGGTTT CGCCCGTCGA CAAGGTGGAC GAACTGAAAG CGCCCGTGCT GGGCCTCTAC GGCGCCAAGG ACACCGTGAT CACGGAAGAC GTGCGCGACA CGATGAAATC CGCGTTGGAG AAATCCAAGA ACCCCAAGGC GCACGCGTCG CGCATCATCG TCTACCCAAA TTCCGGCCAC GCATTTCACG CCGATTACCG CCCGAGCTAC ATAAAGGCCG ACGCAGAAGA TGGCTGGAAG AAGTGCCTCG CCTGGTTCAA GGACCACGGC GTGGTGTAG
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Protein sequence | MQLDAEVESL VPGRSFDRRG FMKTALGSAF AAAVLPVSAQ TVHTDFNGLT AGEVTVPVGD FKMPAYRAQP EGKTKLPVVI VISEIFGVHE YIADICRRFA KLGYLAIAPE LFVRQGDPRA YGTVQETVAN VVSKVPDSQV AGDIDATIAW ATENGGDAAR IGMTGFCWGG RQVWLAAERN PGIKAAVAWY GPLKGNPNPL QPVSPVDKVD ELKAPVLGLY GAKDTVITED VRDTMKSALE KSKNPKAHAS RIIVYPNSGH AFHADYRPSY IKADAEDGWK KCLAWFKDHG VV
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