Gene Rpic12D_2030 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic12D_2030 
Symbol 
ID8019691 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12D 
KingdomBacteria 
Replicon accessionNC_012856 
Strand
Start bp2161485 
End bp2162708 
Gene Length1224 bp 
Protein Length407 aa 
Translation table11 
GC content66% 
IMG OID644830816 
ProductHI0933 family protein 
Protein accessionYP_002981981 
Protein GI241663621 
COG category[R] General function prediction only 
COG ID[COG2081] Predicted flavoproteins 
TIGRFAM ID[TIGR00275] flavoprotein, HI0933 family 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATGCGGT GCGATGTAGC GGTGATCGGC GCAGGCGCGG CCGGGATGAT GTGCGCGGCC 
GTGGCCGGGC AGCGGGGCGC GCGCGTGGTG CTGATCGATC ACGCAACAAA GCTGGCGGAG
AAGATTCGCA TTTCTGGCGG TGGCCGCTGC AACTTCACGA ACATCAACGC GGGTCCGGCC
AACTACCTGT CGAACAACCC GCACTTCAGC CGCTCGGCGC TGGCGCGGTA CACGGCGCAG
GACTTCGTCA GCCTCGTCTC CAGCTACCGC ATTCCGTATC ACGAGAAGCA CAAGGGCCAG
CTCTTCTGCG ACGACAGTGC GGAAGACATC ATCCGCATGC TCGAAACGGA ATGCGAGCGG
GGCAACGTCA TCTGGCGCAC CGGCTGCGCG ATCGCTGAAG TCGGCAAGGA CGGCGAGGCC
TATCGCCTGT CGACCAGTGC GGGCGAGATC GTCGCCAACA AGGTGGTGAT CGCCACGGGC
GGCCTGTCCA TCCCCAAGAT CGGCGCGACC GATTTCGGGT ATCGCATTGC GCGCCAATTC
GGTTTGAAGA TCGTTGAGAC GCACCCGGCA TTGGTGCCGC TCACCTTCAA CGCCGAGCAT
TGGGCGCCGT TCTCGGCGTT GTCGGGCGTG TCGATGGAAG TGGACGTGAC CGTTGCGCAG
CCTCCGGCCA AGGGCGGCCG CAAGGGCAGC GCTACGACGT TCCGAGAAGA CTTGCTGCTC
ACCCATCGCG GGCTGTCGGG TCCGGCGGTG CTGCAGATCT CCAGTTTTTG GCATGCCGGC
CAGCCGCTTC TTATCGATCT GCTGCCGGAC ACCGACGCCG GGCAGTGGCT GTGCGATGAG
AAAACCGGCT CACGCAAGCA ACTCGGTACG GTCCTGGCGC AGCGCCTGCC GGAACGCGTC
GCGCAGGCAT GGTGCGCCAC GCACGGCGCC CACCCGCAGG CCCCGATTGC CGAGTTGCCC
GACAAGGTGC TTCGCAACCT TGGCGCGGCG CTGAACCGAT GGGAACTGAC TCCGTCCGGC
AGTGAAGGGT ACCGGAAGGC CGAAGTGACG CGCGGCGGGG TCGATACGCG CGCGCTGTCC
TCCGCCACGA TGGAGGCCCA ATCGGCGCCC GGCCTGTACT TTATCGGCGA GGTGGTCGAC
GTGACGGGCT GGCTTGGCGG CTACAACTTC CAATGGGCGT GGGCTTCGGC CGTCGCGGCG
GGCGAGGCTG CCTCGGCCCG CTGA
 
Protein sequence
MMRCDVAVIG AGAAGMMCAA VAGQRGARVV LIDHATKLAE KIRISGGGRC NFTNINAGPA 
NYLSNNPHFS RSALARYTAQ DFVSLVSSYR IPYHEKHKGQ LFCDDSAEDI IRMLETECER
GNVIWRTGCA IAEVGKDGEA YRLSTSAGEI VANKVVIATG GLSIPKIGAT DFGYRIARQF
GLKIVETHPA LVPLTFNAEH WAPFSALSGV SMEVDVTVAQ PPAKGGRKGS ATTFREDLLL
THRGLSGPAV LQISSFWHAG QPLLIDLLPD TDAGQWLCDE KTGSRKQLGT VLAQRLPERV
AQAWCATHGA HPQAPIAELP DKVLRNLGAA LNRWELTPSG SEGYRKAEVT RGGVDTRALS
SATMEAQSAP GLYFIGEVVD VTGWLGGYNF QWAWASAVAA GEAASAR