Gene Rpic12D_2025 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic12D_2025 
Symbol 
ID8019685 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12D 
KingdomBacteria 
Replicon accessionNC_012856 
Strand
Start bp2153722 
End bp2155317 
Gene Length1596 bp 
Protein Length531 aa 
Translation table11 
GC content63% 
IMG OID644830810 
Producthypothetical protein 
Protein accessionYP_002981976 
Protein GI241663616 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.545482 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value0.939283 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGGTAGTC GACGTCATCT TTTTGTTGTC ATGGCAATCA GTTGCATAGT TGCCATGCCG 
TTCATTGGCG GGTGCGGCGG GGCAGACGAC CCCGGCTCGT CGGATGTTGC GCAGTGTTCG
GGCAGCTCTT GCCCGCCCAG CGGAGCGGTC ACCACACCGA GCACGCCGAC CAGTCTGTGC
CCGGCAGCGC TCGACTACAC GACGACGTAC ACGGGCGGCT CGGGCAGCGG CGAGTACATC
AAGGTCAAGT TCGACACGAG CAAGAACACG TACCAGATGC AGTTTCTGGA ATCGTCGGTG
CCGACCTCGG CGGGTCAGGT CAATACGACG CGCAAGGGCT TGACCATCAA CGGCACGTTC
GTCCATCCGA CCAACTTGCC GACGCCCGAG CAGAACCGCT GTGCTTTCGT TCTGCAGTCG
GGCAAGACGG CGGACAACAG CTACGCGATC ACCGTCAATC CGCAAGACCC GCCGATGCTG
TTTGTCGGCC AGGGCATCGT GGGGGGCGGC ATTCCGGGGG CGACGATCCA GTTTGCCGGC
ATTCAGCCGA TTCCCGGCGT CGTGATTGGC GCAGTGCCCT CGCGCACGTT CGACTTCTAT
CCGTTCCTGG GCTTCTCCGA GACAGTGACG GATTTCTCGC AGGTTGCTGG GCGCTACAAC
CAGGTTGGCG TGCATGTCAC GCCCACGGGT TCGGGCAACC AGACCTCGGC GCCGCAAGGC
TGGCAGCCCG ACGCCGTCAA CTGGACGCAA ACGTTAAAAG CGGACGGCTC GTGTACGGCC
GAAGGGATCG ACTATTCCTG CCACACGACG GGCACGCCCT GGACGCTGCG TCAGAACACC
GATGGCTCGC AGGACAACGT GTTTGTCAGC AACCCGACCA GCAGCAGCGT GCCGTATCCG
TATGTCGGTC AAGTGTCGCC GCTGGTGCTG CTGGCGCCGA GCCAGGCCAA GGGGATTTTG
ATTGCCGGCA AGCTCAACGG GCAGGTGGTG CCGGTGGTGA TCCGTGTCGG CTATTCGCAT
AGCGATCCGA CAAACCTGCT GGCTTCGGTG GCGGATGATC AGATCGGCAT CTCGATCCTG
TCACCTGCAA CGGCGATCCC GGCCAATGCG CTCAAGGGGG GCTATGTGGG AGCGACCAGC
GGCTCAGCTT GCGGCGTGGT CACTAACAAC GGTCCGAGCG GTGCGCCTGC CAGCGGCAAC
GGCTTGAACG CGACGATCGA TCATCCGGAG CTGTCGGGTT CCTACAGCGG TGGCTTCTTC
CACGCCAATG CCGGCAACTG CAGCGACGGC ACGGCTGTAT CGACGCTGGC CGCCAACTAC
ACCTCGACGC TGTTCCAGAA CGGCACCGCC GCCTTCATCA ACCCGCTTAC GTCACGTGTG
ACGGCGCAGT TCGGGCTCGA CTACACGCAA ACCTCGCCGG GCAAGCTGAT CGTGACCGCG
CAGAACGACT TCAACGCGCG GGGCGCCAGC GGCAACGTCG CGTTGTTCAA GGCGGGAGAC
ACCGGCGTGG CGGTCAAGGT CGGCAACGTG TACGCGATGC TCATGAACAA CAACAAGTAC
AACCCGTTCT TCACGGTCGG CGCATTCGTC CAGTGA
 
Protein sequence
MGSRRHLFVV MAISCIVAMP FIGGCGGADD PGSSDVAQCS GSSCPPSGAV TTPSTPTSLC 
PAALDYTTTY TGGSGSGEYI KVKFDTSKNT YQMQFLESSV PTSAGQVNTT RKGLTINGTF
VHPTNLPTPE QNRCAFVLQS GKTADNSYAI TVNPQDPPML FVGQGIVGGG IPGATIQFAG
IQPIPGVVIG AVPSRTFDFY PFLGFSETVT DFSQVAGRYN QVGVHVTPTG SGNQTSAPQG
WQPDAVNWTQ TLKADGSCTA EGIDYSCHTT GTPWTLRQNT DGSQDNVFVS NPTSSSVPYP
YVGQVSPLVL LAPSQAKGIL IAGKLNGQVV PVVIRVGYSH SDPTNLLASV ADDQIGISIL
SPATAIPANA LKGGYVGATS GSACGVVTNN GPSGAPASGN GLNATIDHPE LSGSYSGGFF
HANAGNCSDG TAVSTLAANY TSTLFQNGTA AFINPLTSRV TAQFGLDYTQ TSPGKLIVTA
QNDFNARGAS GNVALFKAGD TGVAVKVGNV YAMLMNNNKY NPFFTVGAFV Q