| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpic12D_2024 |
|---|
| Symbol | |
|---|
| ID | 8019684 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Ralstonia pickettii 12D |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012856 |
|---|
| Strand | - |
|---|
| Start bp | 2152371 |
|---|
| End bp | 2153630 |
|---|
| Gene Length | 1260 bp |
|---|
| Protein Length | 419 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 644830809 |
|---|
| Product | putative lipoprotein |
|---|
| Protein accession | YP_002981975 |
|---|
| Protein GI | 241663615 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 7 |
|---|
| Plasmid unclonability p-value | 0.0718316 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 22 |
|---|
| Fosmid unclonability p-value | 0.927373 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCAATGGC GTAAATGGTT GGTCGTGCTC GCGTGCGCGC CGATGGTGAC GGCGTGTGGA
GGCGGCGGAG ATGATTCGCC GGCCCCGGTG ATCCAGCGCC TGTGTCCGCA GGCCATCGAC
TACAACACCG TGTTCACCGG CGGGTCGGGC TCGGGCGAAC TCGTGAAGGT GCAGCTCGAC
ACAACGAAGA TGACGTACCA GATCACGTAT CTGGCCTCGC CAATTCCGGT CAAGACGGGC
ACCGTGGCGC CCACCCGCGA TACGGCGCCC AACAACGTGC AGACCGGCAC GCTCACGCAA
GAGACGGCGC TGCCGACCGA GAAGCTGAAC CAGTGCGCGT TCCGCCTGAA TAACGCGAGC
CTCGATCCGA GCCGGCCTGC GCGGTTCTTC CTCGGGCAGG GCGTGCTCGG CGGCACGATT
CCGGGTGCGA CGATTCAGTT CGACGGCATC GTTGGCGTGG GCAAGATTGC GCAGACCACG
TTCCCGTATT ACCCGTTCAT CAGCTTCTCG AACACTGAGA CCGATCTGAA CAGGATCGCT
GGTAATTACA ACCAGCTTGG CTATCACCAG GTGCCGTCGC AGAACTTCTC GCAGCAGGCG
GTCGATGCGC GTTTCACCAT CAACGCGGAC GGCACCTACA CCGAGTGCGA CAACCTGGGC
GTCAAGAACG GCGGAGCCTG CCTGACGTCA AGCGCAACGG TCAACCAGAA GCTGACGCTG
CGCGGCGACG CGCCGGCCTT CACCACGCTG AACTATCAGC CGCAGGTGCC GGCAACGGTG
TCGTCGCTGG ATCCGGCCAA GGCGGGCAAG GGCGTGATGA TCGTCGGCAA GCTGTATGGC
CAGCTCGTAC CGATCTTCAT TCGCGTCGGT GCGGCCAATT CCGATCTGAC GGCCGGTCCG
CCGGTGGCAG ATGACGAGTC CGGCATTTCG ATGATGGCGC CGGTCGGCAA CGTCGCGCAG
GGCTCGCAAG ACGGCGAATA CACAGGTGTA GACAGCACGT TCAACTATCG CGCGACGGCG
CTGGTGGGCG CGCAGGCCAC GATGCTCGAT CCGTTCAACG CATCGCAGGC TGCGCTGGCG
CGACCGCTGA ATCTCGACTT CACGCAGAGC GTCCCGGGCG TGATCCGCAC CACGCAGACC
AGCGCGCCGG CCGGCTCGGC CCCGACGGGC AAGCTCATCT TTACCGGCAA GACCTTCGGC
TTCCTGGACA TGAGCGATAC GAAGAACCCG TACTTCACCG TGGGCGCCTT CGTGCAGTGA
|
|---|
| Protein sequence | MQWRKWLVVL ACAPMVTACG GGGDDSPAPV IQRLCPQAID YNTVFTGGSG SGELVKVQLD
TTKMTYQITY LASPIPVKTG TVAPTRDTAP NNVQTGTLTQ ETALPTEKLN QCAFRLNNAS
LDPSRPARFF LGQGVLGGTI PGATIQFDGI VGVGKIAQTT FPYYPFISFS NTETDLNRIA
GNYNQLGYHQ VPSQNFSQQA VDARFTINAD GTYTECDNLG VKNGGACLTS SATVNQKLTL
RGDAPAFTTL NYQPQVPATV SSLDPAKAGK GVMIVGKLYG QLVPIFIRVG AANSDLTAGP
PVADDESGIS MMAPVGNVAQ GSQDGEYTGV DSTFNYRATA LVGAQATMLD PFNASQAALA
RPLNLDFTQS VPGVIRTTQT SAPAGSAPTG KLIFTGKTFG FLDMSDTKNP YFTVGAFVQ
|
|---|
| |