| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpic12D_2016 |
|---|
| Symbol | |
|---|
| ID | 8019676 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Ralstonia pickettii 12D |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012856 |
|---|
| Strand | + |
|---|
| Start bp | 2144011 |
|---|
| End bp | 2144826 |
|---|
| Gene Length | 816 bp |
|---|
| Protein Length | 271 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 62% |
|---|
| IMG OID | 644830802 |
|---|
| Product | beta-lactamase domain protein |
|---|
| Protein accession | YP_002981968 |
|---|
| Protein GI | 241663608 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG0426] Uncharacterized flavoproteins |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 11 |
|---|
| Plasmid unclonability p-value | 0.412379 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 23 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGTCACAA CGCTCTATGA ATCGCCCGAG CATGTCTGCC TGATGTTCTC CGACCTCGTC
GACGATCACG ATGACCTGCC GGTGCAGACC AACCAGTTCC TCATTGTCGA TCACGGCCAC
GGCGCGCTGA TCGATCCGGG CGGCCAGATG ACTTATAACG CGCTGTTTCT GGCGATGAAC
CGGTACTTTC CGCCCAAGCA GCTCGACTAC GTACTGGCCT CGCATGCTGA CCCCGACATC
GTCGCTTCGG CGGGACGGTG GCTCACGAGT TCCAGTTGCG ACATCCTGAT TTCGCGCGTG
TGGGAGCGGT TTCTCCCGCA TTTCTGCAAC GTCGGCAAGA CTGAAGGCCG CATCGTGCCA
ATCCCCGATA CGGGCATGGC GATTCCGCTG GGGGATTCGC ATCTGCTGGC GGTGCCAGCG
CATTTCCTCC ATTCGGAAGG CAATTTCCAG TTTTACGATC CGGTGTCGCG CATCCTGTTC
TCGGGCGATC TGGGGGCATC GATGGTGCAC GCCAACGTGG CCGCCAGGCC CGTGGACGAT
TTCGATACCC ACTTGGCGCT GATGGCGCCC TTTCACCGCC GCTACATGAG CGGCAACCGG
GTATGCCGGC TGTGGGCGCA GATGGTGCGG GGGCTCGATA TTGAATGGAT CGTGCCGCAG
CACGGCCAAG CCTTTCGCGG CAAAGCCATG GTCAAGCGGT TCATCGATTG GGTTGAGACG
CTCGACTGCG GCATCGACCT GATGACGCCC GAGATTTTCC GCCTGCCCGC GTTGCCGAAG
GCACCGGCCG GGGCGGCGCT CAAGACGCGC GTGTAG
|
|---|
| Protein sequence | MVTTLYESPE HVCLMFSDLV DDHDDLPVQT NQFLIVDHGH GALIDPGGQM TYNALFLAMN
RYFPPKQLDY VLASHADPDI VASAGRWLTS SSCDILISRV WERFLPHFCN VGKTEGRIVP
IPDTGMAIPL GDSHLLAVPA HFLHSEGNFQ FYDPVSRILF SGDLGASMVH ANVAARPVDD
FDTHLALMAP FHRRYMSGNR VCRLWAQMVR GLDIEWIVPQ HGQAFRGKAM VKRFIDWVET
LDCGIDLMTP EIFRLPALPK APAGAALKTR V
|
|---|
| |