Gene Rpic12D_2011 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic12D_2011 
Symbol 
ID8019671 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12D 
KingdomBacteria 
Replicon accessionNC_012856 
Strand
Start bp2138870 
End bp2139442 
Gene Length573 bp 
Protein Length190 aa 
Translation table11 
GC content62% 
IMG OID644830797 
Productflavodoxin/nitric oxide synthase 
Protein accessionYP_002981963 
Protein GI241663603 
COG category[R] General function prediction only 
COG ID[COG0655] Multimeric flavodoxin WrbA 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.61613 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value0.977185 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCACGAG TTGCAGTCGT TTATCACAGC GGTTATGGCC ACACGAAGAA GCAGGCAGAG 
GCCGTCTTTG CTGGCATTCA AGGCGCCGGC GCCGAAGCGC ACCTGATCTC GGTCACAGAC
GTCAATGACG ACACGTGGGC GCTGCTGGCC GGCGTCGACA CGATCGTCTT TGGCGCGCCG
ACCTACATGG GCGGCGTTTC GGGCGACTTC AAGAAATTTG CCGATGCATC GTCCAAGGCG
TGGTTTACCG GCGCGTGGAA GGACAAGATC GCCGCCGGGT TCACGAACTC CGCATCGATG
AACGGCGACA AGTATGCGTC GATCCAGTAC CTGTGGACGC TGTCGCAGCA GCACGGAATG
ATCTGGGTCG GCACAGGCAT GATGCCGGCT AACAGCAAAG CCGCCACGCG TAACGACGTG
AACTATCTCG CTGGCTTTGG CGGCGCGCTG GCGCAATCGC CGTCGGATGC GAGCCCTGAA
GAAGGTCCGC TGCCGGGTGA CCTGGAAACC GCCAAGCTGT TCGGCGAGCG CATTGTCGCC
ATCACGGACC AGTTCGTGCG CGGCCGCCAG TAA
 
Protein sequence
MARVAVVYHS GYGHTKKQAE AVFAGIQGAG AEAHLISVTD VNDDTWALLA GVDTIVFGAP 
TYMGGVSGDF KKFADASSKA WFTGAWKDKI AAGFTNSASM NGDKYASIQY LWTLSQQHGM
IWVGTGMMPA NSKAATRNDV NYLAGFGGAL AQSPSDASPE EGPLPGDLET AKLFGERIVA
ITDQFVRGRQ