| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpic12D_2006 |
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| Symbol | |
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| ID | 8019666 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia pickettii 12D |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012856 |
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| Strand | - |
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| Start bp | 2131740 |
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| End bp | 2133020 |
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| Gene Length | 1281 bp |
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| Protein Length | 426 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 644830792 |
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| Product | O-antigen polymerase |
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| Protein accession | YP_002981958 |
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| Protein GI | 241663598 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG3307] Lipid A core - O-antigen ligase and related enzymes |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.188841 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 0.439827 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCGGCT TGATGCAACG TGGCCGGACA CTGATATCCA GCGCGCCGGC GGCGCTGGCC
GTGTTTGGAA TCGCCATCCT GCCGGCCTTC ATGCTGTCGG TGCGCGGCGC AGCGTTCCTG
TCCTTCTTGC TGCTGCTGGT TGCTGCGTTG TGGTCGATGC TGGCCTCCCC TGCGGATGCC
ATGAATCGAC TGCGAGCGAT GTGGCATGAA CACCGCTGGC TGATTCTCGC CATGGCCGCC
ATGCCGACGG CGATGCTGAT CAGTGCCCAG TTGAACCCTG CCGCACCGCG CAGTGTGCCA
TTTGCCTATG GCCGGCTCTG GCTGTTCGGG CTGGCGCTGT TTGCGCTGTT GCAATTGCGG
CCTACACAGC TGGAGAGCGT GCAGTGGGGC TGCGTTGCGG GCGCGCTGGC CTCGATTGTA
TGGGCTTATC TCGAATTGCG TGTCGGGCGG CCAGACATGA TCGGCGCATT CGCCAACACG
ATCCCTTTCG GCAATCTATC GTTGCTCATG GGGCTGTTCT CACTGATTTC CATTGGATGG
TCCAAGGGGG ACGGCTGGCT GCTTATCATC TTGCGCGTGG TGGCTGGTGG CGCTGGACTC
TATGCGTCGT ATCTGTCGCA GTCGCGCGGC GGCTGGATTG CCATCCCTGT ACTGTTGCTG
ATTGCCGTGG CAACGCTGCG GCATGTGGCT TGGAAGAAGC GAGTGACTGC CTTGCTGGTG
TTCTTCGCAC TGTTGGCAGC GGTATGCGTT TCGTCGAGTG TGGTCCGTGC CCGTTTCGAT
CAGGCAGTCA GTGATCTACG CGCCTATCAA GCTGGTCAGA CCAACACGTC AATCGGCATC
CGCTTCCAAC TTTGGAAAGC GGCCGCATTG ATGTTGACGC GCCACCCGCT CGCCGGGGTG
GGTAGAGGCC AATTCGAGCC CGCTCTCAAA GCGATTCACG CGGAAGGGCT GATCACCCAG
GAAGCGACTG CAGTCGAGCA TGCCCACAAC GAGTTTCTAT ACAATGGCGC CACGCTTGGC
GTGCTGGGCA TCGGCGCATT GCTGGCGATG TACCTGGTGC CTGCCGTGTA CTTCGTGCGT
GCAGCGCTGT GCGACGATGG CATCCTGCGC ACCACGGGGG CGATGGGCCT GACGTTATGT
GTAGGCTTTG TCTTGTTCGG GTTGACCGAA GTGATGCTGA TCATCGCCCA GACGGTCGTG
TTCTACAGCG TGATGGTAGC GATATTCACC GCGCATATTC ACCGGCGCCG GCAGCAGCTT
GGCGCCGCTC CCGTTTTCTA A
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| Protein sequence | MSGLMQRGRT LISSAPAALA VFGIAILPAF MLSVRGAAFL SFLLLLVAAL WSMLASPADA
MNRLRAMWHE HRWLILAMAA MPTAMLISAQ LNPAAPRSVP FAYGRLWLFG LALFALLQLR
PTQLESVQWG CVAGALASIV WAYLELRVGR PDMIGAFANT IPFGNLSLLM GLFSLISIGW
SKGDGWLLII LRVVAGGAGL YASYLSQSRG GWIAIPVLLL IAVATLRHVA WKKRVTALLV
FFALLAAVCV SSSVVRARFD QAVSDLRAYQ AGQTNTSIGI RFQLWKAAAL MLTRHPLAGV
GRGQFEPALK AIHAEGLITQ EATAVEHAHN EFLYNGATLG VLGIGALLAM YLVPAVYFVR
AALCDDGILR TTGAMGLTLC VGFVLFGLTE VMLIIAQTVV FYSVMVAIFT AHIHRRRQQL
GAAPVF
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