Gene Rpic12D_1994 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic12D_1994 
Symbol 
ID8019654 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12D 
KingdomBacteria 
Replicon accessionNC_012856 
Strand
Start bp2117898 
End bp2118521 
Gene Length624 bp 
Protein Length207 aa 
Translation table11 
GC content67% 
IMG OID644830780 
ProductMaf-like protein 
Protein accessionYP_002981946 
Protein GI241663586 
COG category[D] Cell cycle control, cell division, chromosome partitioning 
COG ID[COG0424] Nucleotide-binding protein implicated in inhibition of septum formation 
TIGRFAM ID[TIGR00172] MAF protein 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.659233 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value0.642936 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCATGG ATGCACACGG CGCGCCGCAC CTCTATCTCG CCTCGCAAAG CCCGCGCCGG 
CAGGAACTGC TGCGCCAGAT CGGCGCGCGC TTCGAGCTGC TGCTCGCCAG CGACGATGAA
GATGCGGAAG CGCTGGAAGC CGAGCTCCCC GGCGAGACGC CCGACGACTA CGTTCAACGG
GTCTGCGCAT TGAAGGCGCA GGCGGCTGTG CGTCGCCGCA CTGCACGCAA CCTCCCCGCT
TTGCCGATCC TCACGTCTGA CACGACGGTG TGCCTGGGCG GCGAGATCCT CGGCAAACCC
GCTGACGCAG CCGACGCCCA TCGCATGCTG CGCGGCATGT CAGGCCGCCA ACACCGCGTG
CTGACCGCCG TGACCGTCGT CAAGGCCGAC GGCACGCCGA TGCATGCGCT GTCCGCTTCG
GACGTGCGCT TTGCCGTGCT GACGGACAAC GACATCGCCC GCTACATCGC CAGCGGCGAG
CCCTTTGGCA AGGCGGGCGC GTACGGCATC CAGGGGCGCG CAGCCGCCTT TGTGGCCCAT
ATTTCGGGAA GCTATTCGGG TATCATGGGT CTACCCCTGT TCGAGACCGC CGCACTGCTC
GCACAGGCGG GCATCACGCT GTGA
 
Protein sequence
MTMDAHGAPH LYLASQSPRR QELLRQIGAR FELLLASDDE DAEALEAELP GETPDDYVQR 
VCALKAQAAV RRRTARNLPA LPILTSDTTV CLGGEILGKP ADAADAHRML RGMSGRQHRV
LTAVTVVKAD GTPMHALSAS DVRFAVLTDN DIARYIASGE PFGKAGAYGI QGRAAAFVAH
ISGSYSGIMG LPLFETAALL AQAGITL