Gene Rpic12D_1992 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic12D_1992 
Symbol 
ID8019652 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12D 
KingdomBacteria 
Replicon accessionNC_012856 
Strand
Start bp2116768 
End bp2117409 
Gene Length642 bp 
Protein Length213 aa 
Translation table11 
GC content66% 
IMG OID644830778 
Productiojap-like protein 
Protein accessionYP_002981944 
Protein GI241663584 
COG category[S] Function unknown 
COG ID[COG0799] Uncharacterized homolog of plant Iojap protein 
TIGRFAM ID[TIGR00090] iojap-like ribosome-associated protein 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0989402 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value0.862271 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGATATTC GCAAACTACA ACGCGTGATC GTCGACGCGC TCGAAGACGT CAAGGCGCAA 
GACATCAAGG TCTTCAATAC GACGCACCTG ACCGAACTGT TCGACCGCAC GGTCATTGCC
AGCGGCACCT CCAACCGCCA GACCAAGGCC CTCGCCGCCT CCGTGCGTGA CGCCGTCAAG
GAAGCCGGCG GCCACATCAT CGCCGTGGAA GGCGAAGACG TGGGCGAATG GGTGCTGGTC
GACTGCGGCG ACGCCGTGGT CCACATCATG CAGCCGCAGC TGCGCCTGTA CTACAACCTC
GAAGAGATCT GGGGTGACAA GCCGGTGCGC ATCGAACTCG GCGGCACCGG CAAGCGCGGT
CTGCCCAAGG CCAGCGAAGG TTACGACGAC GAGGAAGACG AGACCGAAGA GGTCACGCCC
GCCAAGCGCC GGACCACCAA GCCGAAGCTG GCAGGCGAGC GCCCGACCAA GGCCGCCGCA
CCGGCCAAGA AGGCTCCCGC CAAGACGGCT GCCAAGAAGC CCGCCACCAA GCGCGCGGCC
GGCACGGGCA AGACCGCCAC GAAGACGGCC ACCAAAACCG CCGCAAAAAC CGCCACCAAA
ACGGCAGCCA AGCGCGCGCC GGCCAAGAAG CGCGCGGCGT AA
 
Protein sequence
MDIRKLQRVI VDALEDVKAQ DIKVFNTTHL TELFDRTVIA SGTSNRQTKA LAASVRDAVK 
EAGGHIIAVE GEDVGEWVLV DCGDAVVHIM QPQLRLYYNL EEIWGDKPVR IELGGTGKRG
LPKASEGYDD EEDETEEVTP AKRRTTKPKL AGERPTKAAA PAKKAPAKTA AKKPATKRAA
GTGKTATKTA TKTAAKTATK TAAKRAPAKK RAA