Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rpic12D_1992 |
Symbol | |
ID | 8019652 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia pickettii 12D |
Kingdom | Bacteria |
Replicon accession | NC_012856 |
Strand | + |
Start bp | 2116768 |
End bp | 2117409 |
Gene Length | 642 bp |
Protein Length | 213 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 644830778 |
Product | iojap-like protein |
Protein accession | YP_002981944 |
Protein GI | 241663584 |
COG category | [S] Function unknown |
COG ID | [COG0799] Uncharacterized homolog of plant Iojap protein |
TIGRFAM ID | [TIGR00090] iojap-like ribosome-associated protein |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.0989402 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 23 |
Fosmid unclonability p-value | 0.862271 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGATATTC GCAAACTACA ACGCGTGATC GTCGACGCGC TCGAAGACGT CAAGGCGCAA GACATCAAGG TCTTCAATAC GACGCACCTG ACCGAACTGT TCGACCGCAC GGTCATTGCC AGCGGCACCT CCAACCGCCA GACCAAGGCC CTCGCCGCCT CCGTGCGTGA CGCCGTCAAG GAAGCCGGCG GCCACATCAT CGCCGTGGAA GGCGAAGACG TGGGCGAATG GGTGCTGGTC GACTGCGGCG ACGCCGTGGT CCACATCATG CAGCCGCAGC TGCGCCTGTA CTACAACCTC GAAGAGATCT GGGGTGACAA GCCGGTGCGC ATCGAACTCG GCGGCACCGG CAAGCGCGGT CTGCCCAAGG CCAGCGAAGG TTACGACGAC GAGGAAGACG AGACCGAAGA GGTCACGCCC GCCAAGCGCC GGACCACCAA GCCGAAGCTG GCAGGCGAGC GCCCGACCAA GGCCGCCGCA CCGGCCAAGA AGGCTCCCGC CAAGACGGCT GCCAAGAAGC CCGCCACCAA GCGCGCGGCC GGCACGGGCA AGACCGCCAC GAAGACGGCC ACCAAAACCG CCGCAAAAAC CGCCACCAAA ACGGCAGCCA AGCGCGCGCC GGCCAAGAAG CGCGCGGCGT AA
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Protein sequence | MDIRKLQRVI VDALEDVKAQ DIKVFNTTHL TELFDRTVIA SGTSNRQTKA LAASVRDAVK EAGGHIIAVE GEDVGEWVLV DCGDAVVHIM QPQLRLYYNL EEIWGDKPVR IELGGTGKRG LPKASEGYDD EEDETEEVTP AKRRTTKPKL AGERPTKAAA PAKKAPAKTA AKKPATKRAA GTGKTATKTA TKTAAKTATK TAAKRAPAKK RAA
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