| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpic12D_1986 |
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| Symbol | upp |
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| ID | 8019646 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia pickettii 12D |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012856 |
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| Strand | + |
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| Start bp | 2110381 |
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| End bp | 2111031 |
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| Gene Length | 651 bp |
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| Protein Length | 216 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 644830772 |
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| Product | uracil phosphoribosyltransferase |
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| Protein accession | YP_002981938 |
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| Protein GI | 241663578 |
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| COG category | [F] Nucleotide transport and metabolism |
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| COG ID | [COG0035] Uracil phosphoribosyltransferase |
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| TIGRFAM ID | [TIGR01091] uracil phosphoribosyltransferase |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.252014 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 26 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGAAACAAG ATCCGCGCTT TCCGAACCTG TTCATCCTCA ACCACCCGCT GATCCAGCAC
AAGCTCACGC ACATGCGCGA CAAGGACACG TCGACACGCA CGTTTCGCGA GTTGCTGCGT
GAGATCACGC TGCTGATGGG CTACGAGATC ACCCGCAACC TGCCGCTGAC CAGCCGCCAC
ATCGACACGC CGATGGGCCC GATGGAAGCG CCCGTCATCG CCGGCCGCAA GCTGGCCGTG
GTGCCGGTGC TGCGTGCGGG CGTGGGTATG AGCGACGGCT TGATCGAACT GATTCCGTCG
GCGCGCATCG GCCACATCGG CGTGTACCGT GATGAGCAGC ACCGTCCGGT GGAATACCTC
GTGCGGCTGC CCGACCTGGA AGACCGCACC TTCATCCTGT GCGATCCGAT GGTCGCCACC
GGTTACTCGG CCGTACACGC CGTCGACGTG ATGAAGAAAC GCGGCGTGCC CGACGAGAAC
ATCCTGTTCC TGGCACTCGT GGCGGCGCCC GAAGGCGTAG AGGTGTTCCA GAAGGCGCAT
CCGGGCGTGA AGCTGTTTGT GGCGTCGCTC GATTCGCACC TGGATGAAAA CGCCTACATC
ATCCCGGGCC TAGGCGATGC GGGCGACCGC CTGTTCGGCA CGAAAAACTG A
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| Protein sequence | MKQDPRFPNL FILNHPLIQH KLTHMRDKDT STRTFRELLR EITLLMGYEI TRNLPLTSRH
IDTPMGPMEA PVIAGRKLAV VPVLRAGVGM SDGLIELIPS ARIGHIGVYR DEQHRPVEYL
VRLPDLEDRT FILCDPMVAT GYSAVHAVDV MKKRGVPDEN ILFLALVAAP EGVEVFQKAH
PGVKLFVASL DSHLDENAYI IPGLGDAGDR LFGTKN
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