| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpic12D_1985 |
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| Symbol | |
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| ID | 8019645 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia pickettii 12D |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012856 |
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| Strand | + |
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| Start bp | 2108761 |
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| End bp | 2110314 |
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| Gene Length | 1554 bp |
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| Protein Length | 517 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 644830771 |
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| Product | NCS1 nucleoside transporter family |
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| Protein accession | YP_002981937 |
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| Protein GI | 241663577 |
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| COG category | [F] Nucleotide transport and metabolism
[H] Coenzyme transport and metabolism |
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| COG ID | [COG1953] Cytosine/uracil/thiamine/allantoin permeases |
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| TIGRFAM ID | [TIGR00800] NCS1 nucleoside transporter family |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.671932 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 24 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | TTGTGGCAGC AGCGACCGCC GTACAATCGC GCCTGCATTC CGAACATCTA CAACGACAAC
GGATCCCACT TCGACATGAG CCAAACCACC TCTGCCGCAT TCTCTGCGGA CGCCGCCGGG
GCACCCGACC CGACCCTCTG GAACGAAGAC CTCAACCCGA CCCCGCCCGC CGCCCGCACC
TGGACGGCCA CCAACTACGC CGCGCTGTGG GTGTCGATGG TGGTGTCGGT GCCGGCCTAC
ATGCTGGCTT CGGGCCTGAT GAGCGAGGGC ATGAACTGGT GGCAGGCGGT GCTGACGGTG
TTTCTCGGCA ACCTGATCGT GCTCGTGCCG ATGGTGCTGG TGGGGCACGC AGGTACCAAG
TACGGCATTC CCTTCCCTGT GCTGGTGCGG GCCTCGTTCG GCGTGCGCGG TGCGCAGTTG
CCGGCCATTC TGCGGGCCAT CGTGGCGTGC GGCTGGTTCG GCATCCAGAC GTGGCTGGGC
AGCCAGGCGA TCTACACGAT CCTCAACGTC GTCACGGACA ACATGCTGGT CGGCAGCAAT
ATTCCGGGGC TGGGCATCAA CCCGGGCCAG GGATTCTGCT TCCTGCTGTT CTGGGCGCTG
CACATCTGGC TGATCACCAA GGGGCTCGAA TCGATCAAGC GCTTCCAGGC GCTGGCCACC
CCGCTGCTGA TCCTGGCGGC ACTCGGCCTG GTCTGGTGGG CGTATATCAA TGCGGGCGGC
TTTGGCCCAA TGCTCTCGGC GCCGTCGGCG TTTTCTGCCG GCGGTAAGCG CGCCGGCGAG
TTCTGGGGCT TCTTCTGGCC GTCGCTCACC GCCATGGTCG GCTACTGGGC CACGCTGGCG
CTGAACATTC CCGACTTCAC CCGCTTCGCA CACAGCCAGC GCGACCAGCT CGTCGGGCAA
GCGATCGGCC TGCCGCTGCC GATGGGTCTG CTGGCGCTGG TGGCCGTGCT CGTCACGTCG
TCCACGGTGG TCATCTACGG CCAGGCCATC TGGGATCCGG TTACGCTGGC CGGCAAGATG
ACGGGCCCGT CGGTCATCGT GGCCCTGCTG GCGCTGATCA CCGCCACGCT GATGACGAAC
ATCGCCGCGA ACGTGGTGTC GCCGGCGTAT GACTTTTCAA ACCTGGCGCC GCATCGCATC
TCGTTCCGCA TCGGCGGCTA CATCACGGCG GGCATCGGCC TGGCGATGAT GCCGTGGAAG
ATCCTGGAAA CGACCAAGGG CTACATCTTC ACGTGGCTGG TCGGTTACGG CGCGCTGCTG
GGCCCGGTGG CCGGCATCAT GATGGTCGAT TACTTCCTGG TGCGCCGCAC GGTGCTCAAG
ACCGGCGAGC TGTTCCGCGT GGACGGCCCC TACGGTTACG GCAACGGCTG GAACGGCCGC
GCCATCGTCG CGCTCATCAT CGGCGTGCTG CCCAATCTGC CGGGCTTCTT CAAGCAGGCG
GGATTCGTCG CCAGCGTGCC CGGCGTGTTC GAAGCGCTGT ACACGTATGC GTGGTTCGTG
GGCCTGGCAA TTTCGGCCGT GGTGTACGTG ATCCTGATGC GCGGGCGCCG CTGA
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| Protein sequence | MWQQRPPYNR ACIPNIYNDN GSHFDMSQTT SAAFSADAAG APDPTLWNED LNPTPPAART
WTATNYAALW VSMVVSVPAY MLASGLMSEG MNWWQAVLTV FLGNLIVLVP MVLVGHAGTK
YGIPFPVLVR ASFGVRGAQL PAILRAIVAC GWFGIQTWLG SQAIYTILNV VTDNMLVGSN
IPGLGINPGQ GFCFLLFWAL HIWLITKGLE SIKRFQALAT PLLILAALGL VWWAYINAGG
FGPMLSAPSA FSAGGKRAGE FWGFFWPSLT AMVGYWATLA LNIPDFTRFA HSQRDQLVGQ
AIGLPLPMGL LALVAVLVTS STVVIYGQAI WDPVTLAGKM TGPSVIVALL ALITATLMTN
IAANVVSPAY DFSNLAPHRI SFRIGGYITA GIGLAMMPWK ILETTKGYIF TWLVGYGALL
GPVAGIMMVD YFLVRRTVLK TGELFRVDGP YGYGNGWNGR AIVALIIGVL PNLPGFFKQA
GFVASVPGVF EALYTYAWFV GLAISAVVYV ILMRGRR
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