| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpic12D_1979 |
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| Symbol | |
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| ID | 8019639 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia pickettii 12D |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012856 |
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| Strand | + |
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| Start bp | 2103844 |
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| End bp | 2105001 |
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| Gene Length | 1158 bp |
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| Protein Length | 385 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 644830765 |
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| Product | basic membrane lipoprotein |
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| Protein accession | YP_002981931 |
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| Protein GI | 241663571 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG1744] Uncharacterized ABC-type transport system, periplasmic component/surface lipoprotein |
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| TIGRFAM ID | [TIGR01409] Tat (twin-arginine translocation) pathway signal sequence |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.919981 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 23 |
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| Fosmid unclonability p-value | 0.873808 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAACGTTA CCCGCAGGAT CACGCTGGCC GCCCTGGCCG CCGGCGCTGC CCTGACCCTC
TGGGGTTGCG GCAAGTCCAA CGACAACGCT GGCGGCAATG CCGCGCCGGC CGCGTCCTCG
GCCCCCGCCG CTGCCGCACC GGCTCCGGCC AATGAGCCGC TGAAGATCGC CTTCGTCTAC
GTCGGCCCCG TGGGCGACGC AGGCTGGACC CACGCCCACG ATGACGGCCG CAAGGAAGTC
GAAGCCAAGT TCGGCGACAA GGTGAAGACC AGCTTCGTCG AAAGCGTGCC CGAAAGCGCC
GCGGATGCCG AACGCGTGTT CCGCGACCTG GCCACGCAAG GCAACAAGGT CATCTTCGGT
ACGAGCTTCG GTTTCATGGA ATCGATGCTC AAGGTTGCCA AGGAATTCCC GGACGTGAAG
TTCGAGCACG CCACGGGTTT CAAGACTGCT GACAACCTCG GCCAGTACGA CGTTCGCACG
TATGAAGGCG CATATCTGGC AGGCGTGGTG GCCGGCAAGA TGAGCAAGTC GGGCAAGCTG
GGCGTGGTGG GATCGGTGCC CATCCCCGAG GTGATCCGCA ACATCGATTC GTTCACGCTG
GGCGCACGCA GCGTCAACCC GAAGGCCACC ACCCGCGTGG TGTGGGTCAA CAAGTGGTTC
GATCCGGGCA AGGAGCGCGA AGCGGCCACC ACCCTCATCG GACAGGGCGT TGACGTGCTG
ATGCAGAACA CCGACTCCGC CGCAGTCGTA CAAACCGCGC AAGAGAAAGG CGTCTACGCC
ATCGGCTGGG ACAGCGACAT GACCAAGTTT GGCGAGAAGG CCCACCTGGC TGCCTCGATC
AACAAATGGG GCGTGTACTA CACCAAGGTC ATCGGCGACG TGCTTGAAAA CAAGTGGAAG
CCGGAAACCG TGTGGTGGGG CCTGAAGGAA GGCGCAATCG ACCTGGGCGC GTACAACGCC
GTGGTGCCCG AAGACGTGAA GACGCTGGTC GAGGCCCGCA AGAAGGGCAT CATCGACGGC
TCGGCACCGA TCTGGAAGGG TCCGCTCAAG GACAACACCG GCAAGGAAGT CCTGCCCGCT
GACAAGGTCG CCGACGACGG CTTCCTGCAC GGCATCAAGT TCTACGTCGA CGGCGTGGAA
GGCAAGATTC CGGGCTAA
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| Protein sequence | MNVTRRITLA ALAAGAALTL WGCGKSNDNA GGNAAPAASS APAAAAPAPA NEPLKIAFVY
VGPVGDAGWT HAHDDGRKEV EAKFGDKVKT SFVESVPESA ADAERVFRDL ATQGNKVIFG
TSFGFMESML KVAKEFPDVK FEHATGFKTA DNLGQYDVRT YEGAYLAGVV AGKMSKSGKL
GVVGSVPIPE VIRNIDSFTL GARSVNPKAT TRVVWVNKWF DPGKEREAAT TLIGQGVDVL
MQNTDSAAVV QTAQEKGVYA IGWDSDMTKF GEKAHLAASI NKWGVYYTKV IGDVLENKWK
PETVWWGLKE GAIDLGAYNA VVPEDVKTLV EARKKGIIDG SAPIWKGPLK DNTGKEVLPA
DKVADDGFLH GIKFYVDGVE GKIPG
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