| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpic12D_1970 |
|---|
| Symbol | |
|---|
| ID | 8019630 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Ralstonia pickettii 12D |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012856 |
|---|
| Strand | - |
|---|
| Start bp | 2094046 |
|---|
| End bp | 2095002 |
|---|
| Gene Length | 957 bp |
|---|
| Protein Length | 318 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 63% |
|---|
| IMG OID | 644830756 |
|---|
| Product | protein of unknown function DUF979 |
|---|
| Protein accession | YP_002981922 |
|---|
| Protein GI | 241663562 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG3817] Predicted membrane protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 12 |
|---|
| Plasmid unclonability p-value | 0.555453 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 26 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGATTCTGT CGATCAACTA TCTGTACTGG CTGGCCGGGA TCATCCTGAC GATCACCGCG
CTGATGACCT TTGCCGACAA GAACCACCCC CGTCGCTGGA CCACGGGCCT GTTCTGGGCG
ATCTTCGCCG TCATCTTCCT CGTTGGCGAC AAGCTCCCGC CGATCGTAGT GGGCGTGGGT
GCCGTGGTGA TGGCACTGCT GGCCGGCACG GGCGGCGTGA CGCTGGGCAA GCACGGTGAA
CTGCCGGCAG AAGAGCGCCG CGCATCGGCC AAGCGCCTGG GTAACCGCTT GTTCATTCCG
GCGCTGACCA TTCCGCTGGT CACCGTCATC GGCAGCGTGT TCCTGAAGGA CGTGAAGATC
GGTGGCGACC TGCTGCTCGA TCCGAAGAAC CAGACCTTCG TCTCGCTGGG CCTGGGCTGC
ATCATCTCGC TCGCGCTGGC GTGCTGGCTG ACCCGCGACA CGCCGGTGCA GGCCATGCGT
GAGTCGCGTC GGCTGACGGA GTCGCTCGGC TGGGCGCTGG TGCTGCCGCA GATGCTGGCC
ATGCTCGGCC TGGTCTTTGC CGATGCCGGC GTGGGCAAGG CCGTGGCGCA CCTGACCACC
GCCTACATCA ACATGGACTA TCGCCTGGTC GCCGTGGTGG TCTATTGCGT GGGCATGGCG
TTGTTCACCG TCATCATGGG TAACGGCTTT GCGGCCTTCC CGGTCATGAC AGGCGGTGTG
GGGGTGCCGA TTCTGGTGGG CGTGTTCCAT GCCAACCCGG CGGTGATGGC GGCGATCGGC
ATGTTCTCCG GCTACTGCGG AACGCTCATG ACGCCGATGG CGGCGAACTT CAATATCGTG
CCGGCTGCGC TGCTGGAGTT GTCCGATAAG AACGCTGTGA TCAAAGCGCA AGTCCCGACC
GCGCTACTGT TGCTTGCAGC CAATATCGTG CTCTTGTACT TCCTGATGCT CCACTAA
|
|---|
| Protein sequence | MILSINYLYW LAGIILTITA LMTFADKNHP RRWTTGLFWA IFAVIFLVGD KLPPIVVGVG
AVVMALLAGT GGVTLGKHGE LPAEERRASA KRLGNRLFIP ALTIPLVTVI GSVFLKDVKI
GGDLLLDPKN QTFVSLGLGC IISLALACWL TRDTPVQAMR ESRRLTESLG WALVLPQMLA
MLGLVFADAG VGKAVAHLTT AYINMDYRLV AVVVYCVGMA LFTVIMGNGF AAFPVMTGGV
GVPILVGVFH ANPAVMAAIG MFSGYCGTLM TPMAANFNIV PAALLELSDK NAVIKAQVPT
ALLLLAANIV LLYFLMLH
|
|---|
| |