| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpic12D_1964 |
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| Symbol | |
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| ID | 8019624 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia pickettii 12D |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012856 |
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| Strand | + |
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| Start bp | 2089136 |
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| End bp | 2089720 |
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| Gene Length | 585 bp |
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| Protein Length | 194 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 644830750 |
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| Product | transcriptional regulator, LuxR family |
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| Protein accession | YP_002981916 |
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| Protein GI | 241663556 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG2197] Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.666792 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 23 |
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| Fosmid unclonability p-value | 0.751243 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGAAATCC TCAAGGATGT AAGCGCGATT GCTTTAGCCA ATAGTCTTCC AGACGGCGTC
TTCCTGGTCG ACGAGCGTGG GCGGATTCGT CACGCCAATG CAGCGTGGGA AGACATTCTG
GGTTATCGGG CATCCGATCT GCTGGGGCAG ACCATGCTCG AACTCGTGGC GCCGGACGAC
CGCGACAGAA CGCAAAAGCA AGCGGGTCGC GTGCAGGCTG GCATTAGATG CACCGGATTT
GAGAATCGCT ATCGGCACCA GTCGGGCACC GATGTCCATT TGTCATGGTC GGCACAGTGG
AACGTGGAGC ATCGACTGCG CATTGGCGTG GCGCGCAATG TCACCGCATT GAGGACGCTG
GCGGAGCCCA GCCCACTGGC GCAACTGCAG GCGCGTCTGG CACCTCACGA ATCCAGGGTA
TTGCAGTTGC TGTTGACTGA AGCCGCAGAA AAACAGATTG CGGAACAGCT CGGTCTGGCC
ACGTCGACCA CGCACTCTTA CATCACGAGC GTCTATCGCA AGTTCGGCGT GCGTGGCCGC
GCGGGGCTGA TGAGCCTGTG GCTCAAAGAG ATGCAAAGCC GCTGA
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| Protein sequence | MEILKDVSAI ALANSLPDGV FLVDERGRIR HANAAWEDIL GYRASDLLGQ TMLELVAPDD
RDRTQKQAGR VQAGIRCTGF ENRYRHQSGT DVHLSWSAQW NVEHRLRIGV ARNVTALRTL
AEPSPLAQLQ ARLAPHESRV LQLLLTEAAE KQIAEQLGLA TSTTHSYITS VYRKFGVRGR
AGLMSLWLKE MQSR
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