Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rpic12D_1938 |
Symbol | |
ID | 8019595 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia pickettii 12D |
Kingdom | Bacteria |
Replicon accession | NC_012856 |
Strand | + |
Start bp | 2062067 |
End bp | 2062591 |
Gene Length | 525 bp |
Protein Length | 174 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 644830722 |
Product | OHCU decarboxylase |
Protein accession | YP_002981891 |
Protein GI | 241663531 |
COG category | [S] Function unknown |
COG ID | [COG3195] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | [TIGR03164] OHCU decarboxylase |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.0640799 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 15 |
Fosmid unclonability p-value | 0.0392315 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGCCAGA CCACCTACAA CCTCTCGCAA CTCAACAGCA TGGACGCAGC GCAGTTCGTG CAGGTCCTTG GCGGCATCTA CGAGCACTCG CCGTGGGTTG CCGAACAGGC CGCCACGCAG CGCCCGTTCG CCTCGGCCGA GGCGCTCGCA ACCGCCATGC GCAATGCCGT GGATACCGCC GGCATTGAGC CTCAGCTCAA TCTGGTGCGC GCCCACCCGG AGCTGGCCGG CAAGGCTGCC GTGCGCGGTG AACTGACTGC CGAGTCGACG CGCGAACAAA GCGGCGCAGG CTTGAACCTG TGCACGCCAG AAGAGTTTGC GCGCCTGCAG GCGCTCAACA CCCAGTACAA CGAGAAGTTC GGCTTCCCGT TCATCCTGGC GGTGCGCGGC TATGACCGCC ACGGCATCAT CGACAACTTC AGCAAGCGCG TGGAAAACGA CCGCGATACC GAGCTGCGTA CGTCGCTCGA ACAGATTCAT CGCATCGCAG GTTTCCGCCT GGCCGACTTG ATTTCGGCAA ACTGA
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Protein sequence | MSQTTYNLSQ LNSMDAAQFV QVLGGIYEHS PWVAEQAATQ RPFASAEALA TAMRNAVDTA GIEPQLNLVR AHPELAGKAA VRGELTAEST REQSGAGLNL CTPEEFARLQ ALNTQYNEKF GFPFILAVRG YDRHGIIDNF SKRVENDRDT ELRTSLEQIH RIAGFRLADL ISAN
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