Gene Rpic12D_1938 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic12D_1938 
Symbol 
ID8019595 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12D 
KingdomBacteria 
Replicon accessionNC_012856 
Strand
Start bp2062067 
End bp2062591 
Gene Length525 bp 
Protein Length174 aa 
Translation table11 
GC content63% 
IMG OID644830722 
ProductOHCU decarboxylase 
Protein accessionYP_002981891 
Protein GI241663531 
COG category[S] Function unknown 
COG ID[COG3195] Uncharacterized protein conserved in bacteria 
TIGRFAM ID[TIGR03164] OHCU decarboxylase 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0640799 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value0.0392315 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCCAGA CCACCTACAA CCTCTCGCAA CTCAACAGCA TGGACGCAGC GCAGTTCGTG 
CAGGTCCTTG GCGGCATCTA CGAGCACTCG CCGTGGGTTG CCGAACAGGC CGCCACGCAG
CGCCCGTTCG CCTCGGCCGA GGCGCTCGCA ACCGCCATGC GCAATGCCGT GGATACCGCC
GGCATTGAGC CTCAGCTCAA TCTGGTGCGC GCCCACCCGG AGCTGGCCGG CAAGGCTGCC
GTGCGCGGTG AACTGACTGC CGAGTCGACG CGCGAACAAA GCGGCGCAGG CTTGAACCTG
TGCACGCCAG AAGAGTTTGC GCGCCTGCAG GCGCTCAACA CCCAGTACAA CGAGAAGTTC
GGCTTCCCGT TCATCCTGGC GGTGCGCGGC TATGACCGCC ACGGCATCAT CGACAACTTC
AGCAAGCGCG TGGAAAACGA CCGCGATACC GAGCTGCGTA CGTCGCTCGA ACAGATTCAT
CGCATCGCAG GTTTCCGCCT GGCCGACTTG ATTTCGGCAA ACTGA
 
Protein sequence
MSQTTYNLSQ LNSMDAAQFV QVLGGIYEHS PWVAEQAATQ RPFASAEALA TAMRNAVDTA 
GIEPQLNLVR AHPELAGKAA VRGELTAEST REQSGAGLNL CTPEEFARLQ ALNTQYNEKF
GFPFILAVRG YDRHGIIDNF SKRVENDRDT ELRTSLEQIH RIAGFRLADL ISAN