Gene Rpic12D_1935 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic12D_1935 
Symbol 
ID8019592 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12D 
KingdomBacteria 
Replicon accessionNC_012856 
Strand
Start bp2058164 
End bp2059573 
Gene Length1410 bp 
Protein Length469 aa 
Translation table11 
GC content64% 
IMG OID644830719 
Productxanthine permease 
Protein accessionYP_002981888 
Protein GI241663528 
COG category[F] Nucleotide transport and metabolism 
COG ID[COG2233] Xanthine/uracil permeases 
TIGRFAM ID[TIGR00801] uracil-xanthine permease
[TIGR03173] xanthine permease 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.39014 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value0.0274682 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCAAGCA GCACCATCGC CGCCCCCACG GCGGATCTGA CCAATGAGCG CGTGGCGTAC 
GGACGCCTGC TCGCATTGGG TCTGCAACAT GTATTGGTGA TGTATGCAGG CACCGTGGCA
GTGCCTCTGA TTGTGGGCGG TGCACTGCAT CTGCCCAAGG AACAGCTCGC TTTCCTGATC
AACGCGGATC TCTTTGCCGC CGGCCTTGCC ACCCTCATCC AGGCCTTCGG TATTTGGAAG
TTCGGCATTC GCATGCCGGT CATGATGGGC GTGACCTTCG CATCGGTGGG CCCGATGATC
GCCATCGGCA CGGACCCGAG CATCGGCCTG CTCGGCATCT ACGGCGCGGT GATCGCGGCG
GGGTTGTTCG GCATCGTCGT CGCGCCGCTC ATGGGGCGTG TGCTTGGACT CTTCCCGCCC
GTCGTGACGG GCACCGTCAT CACGCTGATC GGCATGTCGC TGATGGGCGT GGGCATCAAC
TGGGCTGCCG GCGGCCAGCC GACCATGAAA ACCATGGTCG ACGGCGTGCT CAAGACCGTG
CCCAACCCGG CCTACGGCGA CCTGAGCGGC CTTGGCATTG CGCTGGCTGT GCTCGTCATC
ATCCTGTTGC TGACGAAGTA CGGCCGCGGC CTGATCGGCA ACATTGCCGT GCTGCTGGGC
ATCGTGATCG GCACGTTCAT CGCCATGGCA TTCGGCAAGG TCAGCTTTGC CGGCATCACC
GAAGCCGACT GGGTGGCCGT CATCACGCCG CTGCACTTCG GCATGCCGAC CTTCCACTTC
GGTGCCATCG CTTCGATGTG CATCGTGATG TTGATCACCC TGGTGGAATC GACCGGCATG
TTCCTGGCAC TGGCGGAAAT CACCGGCAAG AAGCTCTCCA CCGATGACCT CACGCGCGGC
CTGCGCGCGG ACGGCCTGGG CACCGTGATC GGCGGTGTGT TCAACACGTT CCCATACACG
TCGTTCTCAC AGAACGTCGG GCTGGTGACG GTCACGGGTG TGCGGTCGCG CTTCGTGGCA
GCCATGGGCG GCGTGATTCT CATCGCGCTC GGCCTGTTCC CGAAGATGGC GCACATCGTG
GCGTCGGTTC CTTCGTTCGT GCTGGGCGGG GCGGGCATCG TGATGTTCGG CATGGTGGCC
GCCACGGGTG TGCGCATTCT CGGCTCGATC GATTTCAACA AGTACCGCCA CAACCTCTTC
ATCGTGGCGA TCGCGATCGG TTTCGGCATG ATCCCGACGC TGGCCCCGAC CATCTTCCAG
TACCTGCCGC ATTGGCTGGA GCCCGTCACG CACAGCGGCA TCGTGCTGGG CACGCTGGTC
GCGGTCATCC TGAACCTGTA CTACAACGGC ATGCAGTCGA CCGAGCACGC AATGCGCGAC
GCTGCCGCCA ACACCCACGG CACGGAGTAA
 
Protein sequence
MASSTIAAPT ADLTNERVAY GRLLALGLQH VLVMYAGTVA VPLIVGGALH LPKEQLAFLI 
NADLFAAGLA TLIQAFGIWK FGIRMPVMMG VTFASVGPMI AIGTDPSIGL LGIYGAVIAA
GLFGIVVAPL MGRVLGLFPP VVTGTVITLI GMSLMGVGIN WAAGGQPTMK TMVDGVLKTV
PNPAYGDLSG LGIALAVLVI ILLLTKYGRG LIGNIAVLLG IVIGTFIAMA FGKVSFAGIT
EADWVAVITP LHFGMPTFHF GAIASMCIVM LITLVESTGM FLALAEITGK KLSTDDLTRG
LRADGLGTVI GGVFNTFPYT SFSQNVGLVT VTGVRSRFVA AMGGVILIAL GLFPKMAHIV
ASVPSFVLGG AGIVMFGMVA ATGVRILGSI DFNKYRHNLF IVAIAIGFGM IPTLAPTIFQ
YLPHWLEPVT HSGIVLGTLV AVILNLYYNG MQSTEHAMRD AAANTHGTE