Gene Rpic12D_1933 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic12D_1933 
Symbol 
ID8019590 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12D 
KingdomBacteria 
Replicon accessionNC_012856 
Strand
Start bp2056459 
End bp2056812 
Gene Length354 bp 
Protein Length117 aa 
Translation table11 
GC content64% 
IMG OID644830717 
Producthydroxyisourate hydrolase 
Protein accessionYP_002981886 
Protein GI241663526 
COG category[R] General function prediction only 
COG ID[COG2351] Transthyretin-like protein 
TIGRFAM ID[TIGR02962] hydroxyisourate hydrolase 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value0.0633664 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGGACGCT TGACCACCCA TGTGCTCGAC ACCGCTGCAG GCACGCCGGG CCAAAACCTG 
GCGATCGCAC TGTTCAAAAT TGTCGACAAT CAGCGGCAAC CGATCAAGTC GGTCCGCACC
AATCACGATG GCCGTTGCGA TGCGCCGCTG CTTGAAGGCG ACGCGCTGCA AGCCGGCGTG
TACGAGCTGG ACTTCGGCGT GGGGGAGTAC TACCGCGCCG CCGGCGTCAA ACTCCCCGAG
CCCGCGTTCT TGGACGTGGT GACGCTGCGC TTTGGCGTGG CCGACACCAG TGCGCACTAC
CACGTGCCTC TGCTGGTGTC GCCGTGGTCG TATTCGACCT ATCGCGGCAG CTAA
 
Protein sequence
MGRLTTHVLD TAAGTPGQNL AIALFKIVDN QRQPIKSVRT NHDGRCDAPL LEGDALQAGV 
YELDFGVGEY YRAAGVKLPE PAFLDVVTLR FGVADTSAHY HVPLLVSPWS YSTYRGS