Gene Rpic12D_1932 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic12D_1932 
Symbol 
ID8019589 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12D 
KingdomBacteria 
Replicon accessionNC_012856 
Strand
Start bp2055164 
End bp2056441 
Gene Length1278 bp 
Protein Length425 aa 
Translation table11 
GC content63% 
IMG OID644830716 
Productprotein of unknown function DUF989 
Protein accessionYP_002981885 
Protein GI241663525 
COG category[S] Function unknown 
COG ID[COG3748] Predicted membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value0.0776481 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAAGGCT ATATCCTCGA CTGGGCCAAC TTGCTCTTGC GTTGGCTGCA CGTGATCGTC 
GCGATCGCGT GGATCGGTTC GTCGTTCTAC TTTGTCTGGC TCGATAACAG CCTGACCAAG
CCGACCGCGC CGGACCTGAA GGACAAGGGC GTCGACGGCG AGCTGTGGGC CGTGCACGGC
GGCGGCTTCT ACAACCCGCA GAAGTATCTG CTGGCGCCGA AGCAGCTGCC GGACCATCTG
CACTGGTTCT ACTGGGAGTC GTATTCGACC TGGATGTCGG GCTTCGCCCT GCTGACGGTG
GTGTACCTGT TCAACGCCAA CGTCTACATG ATCGATCGCA GCGTGTTCGA CATGACGGCG
ACGACGGCGG TGTTGCTGGC GCTAGGCTTC CTGGTGGTCG GCTGGCTCGT GTACGACACG
ATCTGCCGCG TGTTCGGCAA GAACGACCGC GTGGTGGGCA TTCTCGTGGC GATCTACGTG
GTGATCGCTG CGTTTGCGGC GTGCCACCTG TTCTCGGGCC GCGCAGCATT CCTGCTGATC
GGGGCGATGA TCGCAACGAT CATGAGTGCC AACGTGTTCT TCTGGATCAT CCCGGGGCAA
CGCAAGGTGG TCGCCTCGCT CAAGGCTGGC GAAAAGCCGG ACCCGATCCA CGGCAAGCGC
GGCAAGCAGC GCAGCGTGCA CAACACGTAC TTCACGCTGC CGGTGCTGTT CGCGATGCTG
TCGAACCACT ACAGCATGAC GTACGCCGCC AAGTACAACT GGGTTGTGCT GGTGCTGATC
ATGCTGGCCG GCGTGCTGAT CCGCCAGTTC TTCATCCTGA AGCACAAGGG CGTCGTGAAC
TGGGGCTATC CGGCAGCGGG CGTGGCTGTG CTGTTGGGTG TGGCGGTGTG GCTCGCTCCG
GTGTCGCGTC CGGCAGCCCC GGTCGCAGAA GCCCCGGCGG CGACGGCGCC TGCAGCAGCG
GCAGAAGGCA GCGCTTCGAC ACCGGCTGCA GCAGGCCAGG CCTCTGCGGC AGCTGCCGGC
AGTTCGGACT TCGCCAAAGT ACAGGCAGTC GTTACCGCAC GGTGCTACCA ATGTCACTCG
GCTCATCCTA CCCTGATGCC TTCACCGGCC AAGGGCGTGT TGCTCGATAC GCCGGAAGAG
CTGGGCAAGC ATGCACAGCT CGTCTACCAG CAGGTCGTGC AGCAAAAGCT GATGCCGCTG
GGTAACGTGA CGCAAATCAC CGACGACGAG CGCACGATCA TCGCCAAGTG GTTCGAAGGC
GGCGCCAAGA CGAACTGA
 
Protein sequence
MEGYILDWAN LLLRWLHVIV AIAWIGSSFY FVWLDNSLTK PTAPDLKDKG VDGELWAVHG 
GGFYNPQKYL LAPKQLPDHL HWFYWESYST WMSGFALLTV VYLFNANVYM IDRSVFDMTA
TTAVLLALGF LVVGWLVYDT ICRVFGKNDR VVGILVAIYV VIAAFAACHL FSGRAAFLLI
GAMIATIMSA NVFFWIIPGQ RKVVASLKAG EKPDPIHGKR GKQRSVHNTY FTLPVLFAML
SNHYSMTYAA KYNWVVLVLI MLAGVLIRQF FILKHKGVVN WGYPAAGVAV LLGVAVWLAP
VSRPAAPVAE APAATAPAAA AEGSASTPAA AGQASAAAAG SSDFAKVQAV VTARCYQCHS
AHPTLMPSPA KGVLLDTPEE LGKHAQLVYQ QVVQQKLMPL GNVTQITDDE RTIIAKWFEG
GAKTN