Gene Rpic12D_1927 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic12D_1927 
Symbol 
ID8019584 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12D 
KingdomBacteria 
Replicon accessionNC_012856 
Strand
Start bp2047064 
End bp2047636 
Gene Length573 bp 
Protein Length190 aa 
Translation table11 
GC content63% 
IMG OID644830711 
Productprotein of unknown function UPF0016 
Protein accessionYP_002981880 
Protein GI241663520 
COG category[S] Function unknown 
COG ID[COG2119] Predicted membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.14267 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value0.0417322 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAAGCCT TTCTCGTCTC CACCGGCATC GTCGCGCTCG CAGAAATCGG CGACAAGACC 
CAGCTGCTGT CGATCCTACT GGCCGCGCGT TTTCGCAAGC CGGTGCCGAT CATTCTCGGC
ATCTTCATCT CCACCCTCGT CAACCACGCA CTGGCCGGCG CCGTCGGTGG CTGGATCACG
CACGTGCTCG GCGAAAACGT GCTGCGGTGG ATCCTGGGCG TGGGCTTTAT CGCCATGGCC
GGCTGGATGC TGATTCCGGA CAAGCTAGAC GACGACGAAG CGCCCTCGAC GACGCAGCGC
GGCCTGGGCA TCCTGGGGAC GACCATCGTT GCGTTCTTCT TTGCCGAGAT GGGCGACAAG
ACGCAGATCG CGACCGTGGC GCTGGCCGCA CGCTTTAACG ACGTGTTTTC TGTCGTGGCG
GGCACCACCG TCGGCATGCT GCTGGCCAAT GTGCCGGCCG TGCTGATGGG CAACAAGTTC
GCCTCGCGTA TGCCGATCAC GCTGGTGCAC CGTATTGCAG CGCTGATCTT CCTGGTGCTG
GGTGTGCTGG CGCTGCTTGG CGTGAGTAAA TAA
 
Protein sequence
MEAFLVSTGI VALAEIGDKT QLLSILLAAR FRKPVPIILG IFISTLVNHA LAGAVGGWIT 
HVLGENVLRW ILGVGFIAMA GWMLIPDKLD DDEAPSTTQR GLGILGTTIV AFFFAEMGDK
TQIATVALAA RFNDVFSVVA GTTVGMLLAN VPAVLMGNKF ASRMPITLVH RIAALIFLVL
GVLALLGVSK