Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rpic12D_1927 |
Symbol | |
ID | 8019584 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia pickettii 12D |
Kingdom | Bacteria |
Replicon accession | NC_012856 |
Strand | + |
Start bp | 2047064 |
End bp | 2047636 |
Gene Length | 573 bp |
Protein Length | 190 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 644830711 |
Product | protein of unknown function UPF0016 |
Protein accession | YP_002981880 |
Protein GI | 241663520 |
COG category | [S] Function unknown |
COG ID | [COG2119] Predicted membrane protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.14267 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 15 |
Fosmid unclonability p-value | 0.0417322 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGAAGCCT TTCTCGTCTC CACCGGCATC GTCGCGCTCG CAGAAATCGG CGACAAGACC CAGCTGCTGT CGATCCTACT GGCCGCGCGT TTTCGCAAGC CGGTGCCGAT CATTCTCGGC ATCTTCATCT CCACCCTCGT CAACCACGCA CTGGCCGGCG CCGTCGGTGG CTGGATCACG CACGTGCTCG GCGAAAACGT GCTGCGGTGG ATCCTGGGCG TGGGCTTTAT CGCCATGGCC GGCTGGATGC TGATTCCGGA CAAGCTAGAC GACGACGAAG CGCCCTCGAC GACGCAGCGC GGCCTGGGCA TCCTGGGGAC GACCATCGTT GCGTTCTTCT TTGCCGAGAT GGGCGACAAG ACGCAGATCG CGACCGTGGC GCTGGCCGCA CGCTTTAACG ACGTGTTTTC TGTCGTGGCG GGCACCACCG TCGGCATGCT GCTGGCCAAT GTGCCGGCCG TGCTGATGGG CAACAAGTTC GCCTCGCGTA TGCCGATCAC GCTGGTGCAC CGTATTGCAG CGCTGATCTT CCTGGTGCTG GGTGTGCTGG CGCTGCTTGG CGTGAGTAAA TAA
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Protein sequence | MEAFLVSTGI VALAEIGDKT QLLSILLAAR FRKPVPIILG IFISTLVNHA LAGAVGGWIT HVLGENVLRW ILGVGFIAMA GWMLIPDKLD DDEAPSTTQR GLGILGTTIV AFFFAEMGDK TQIATVALAA RFNDVFSVVA GTTVGMLLAN VPAVLMGNKF ASRMPITLVH RIAALIFLVL GVLALLGVSK
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