Gene Rpic12D_1924 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic12D_1924 
Symbol 
ID8019581 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12D 
KingdomBacteria 
Replicon accessionNC_012856 
Strand
Start bp2043402 
End bp2044436 
Gene Length1035 bp 
Protein Length344 aa 
Translation table11 
GC content67% 
IMG OID644830708 
Productxanthine dehydrogenase accessory protein XdhC 
Protein accessionYP_002981877 
Protein GI241663517 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG1975] Xanthine and CO dehydrogenases maturation factor, XdhC/CoxF family 
TIGRFAM ID[TIGR02964] xanthine dehydrogenase accessory protein XdhC 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.170465 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value0.258839 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGACCACA CGCAACTGCG CCCATTCCGC TTCGCCGACG TGCTCGCCAC CGTGCAAGCG 
GCGCAGCCGT GCGTGCTGGT CACGGTAACG GACGTGCAGG GCTCTGCCCC GCGCGAACCA
GGCACGCTGA TGCTGGTATG CGCCGACGGC TTTTTCGGCA CCATCGGCGG CGGCCATCTC
GAATGGCGTG CGATGGAAAT CGCGCAGACG ATGATGAATG CGCCTGAAGC CGCCGGCGAA
GCACGTCGGC AGTTCGTGCG CATTCCGCTC GGCCCTGCGC TCGGCCAATG CTGCGGCGGC
GTGGTGCGGC TGTCGCTTGA ACGACTCGAC GCGCGTGATG TGAAGTGGAT CGCGCTGGCC
GACGACGCCA TGCGCCAACG CCGCAGCCTG CGCCGTATCG TCTCCGCCGA TCCGGCGGTC
GCGGTTGAAG CGAGCGTGGC CGACGCAGCC GCAGCCGGCG TGCAACTCGA CGCCAGCGGC
TTCACCCAAA CCGTGCTGCC GCCCGACATG TCGATCGTTC TGTGTGGCGC GGGCCACGTC
GGCCACGCCA TCGTGCGCGC ACTGGCGCAT CTGCCCTGTC GCGTCACGTG GGTTGACGAG
CGGGATGCGA TGTTCCCGTT TCCCACGGAA GTGCCGCCGA ACGTCGTCAT CGAATCCACC
GATACGCCGG AAGCCGTGAT CGACCACGCG CCCGCGGGCA GCTACTTCCT GGTCATGACG
CACAACCATG CGTTGGATCT CGCGCTGTGC GAACGCATCA TGCGCCGCAC GGACTTTGCC
TACTTCGGTC TGATCGGTTC CAAGACGAAG CGCGCGCGTT TCGAGCACCG CATGGTCGAG
CACGGCGTGG ACCCGGCCCG CCTGCCGGAA ATGGTGTGCC CGATTGGCGT GGCGGGCATC
GTGGACAAGG CGCCGGATAT CATTGCGGTA TCCGTCGTCG CGCAACTCCT GCAGGTGCGA
GAGCTGCAGC AACATGCGCT CACCAGCGCC AGCAGTGGCG CGACGGTTCC TTACCGAGTC
CCTACATCCG TCTGA
 
Protein sequence
MDHTQLRPFR FADVLATVQA AQPCVLVTVT DVQGSAPREP GTLMLVCADG FFGTIGGGHL 
EWRAMEIAQT MMNAPEAAGE ARRQFVRIPL GPALGQCCGG VVRLSLERLD ARDVKWIALA
DDAMRQRRSL RRIVSADPAV AVEASVADAA AAGVQLDASG FTQTVLPPDM SIVLCGAGHV
GHAIVRALAH LPCRVTWVDE RDAMFPFPTE VPPNVVIEST DTPEAVIDHA PAGSYFLVMT
HNHALDLALC ERIMRRTDFA YFGLIGSKTK RARFEHRMVE HGVDPARLPE MVCPIGVAGI
VDKAPDIIAV SVVAQLLQVR ELQQHALTSA SSGATVPYRV PTSV