Gene Rpic12D_1920 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic12D_1920 
Symbol 
ID8019577 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12D 
KingdomBacteria 
Replicon accessionNC_012856 
Strand
Start bp2037446 
End bp2038294 
Gene Length849 bp 
Protein Length282 aa 
Translation table11 
GC content61% 
IMG OID644830704 
Productextracellular solute-binding protein family 1 
Protein accessionYP_002981873 
Protein GI241663513 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG2998] ABC-type tungstate transport system, permease component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.814607 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCCCGAT TGTCCAAAGC CCTTCGGCTA TCTGCTCTCA TCTGCCTGAC GCTCGCGGTT 
GCCACTCCCG CATATGCTGG TGATCTCCGC ATGGCTACCA CCACCAGCAC AGAGAATTCC
GGTCTGCTGA AGGTCCTGTT GCCCAAATTT GAGGCCGCCA CCGGCGTGCA TGTGCAGGTG
ATTGCCGTTG GCACTGGCAA GGCGGTCAAA TTGGGTGAAT CGGGGGATGT GGATGTGGTG
CTGGTGCACG CCCGCCCACT GGAAGACGCC TTCGTCGCCT CAGGGGGTGG CATCGACCGC
CGCGACGTGA TGTACAACGA TTTCATCCTC GTCGGCCCAG ACACGGACCC GGCTCACGTG
CGGGGCCAGA AGAACGTCAT TCAGGGGATG GAGACCATCG CTGCGGCTGG CGAGAAAGCC
GGCGCCAAGT TCGTCTCGCG CGGCGACAAC TCCGGCACCG ATGTCATGGA AAAGGCCTAT
TGGAAGACGG CCAACATCGA CCCGAAGGGC AAGCCGTGGT ACGTGAGCGC AGGGCTCGGA
ATGGGCGAAG TGCTGAACAT GGCCGCGCAG ATGAACGCCT ACACGCTGTC CGACCGCGCG
ACCTACGGCG CCTACCGTGC CAAAACGGGT CTCGACATCG TGTTGGCCGG CGACCCGCGC
ATGTTCAACC CCTACGGCAT CATCGCGGTC AACCCGAAGA GATACCCGAG CGTCAACTAC
ACCGATGCAA CCAAGCTGAT CGAATGGATC ACGTCACCCG CCGGTCAGCA GGTCATTGCC
GACTTCAAGG TCAACGGAGA GCAGGTGTTC TTCCCGGACT ACGGGAAGGC GGTCGCAACC
GGAAAATAG
 
Protein sequence
MPRLSKALRL SALICLTLAV ATPAYAGDLR MATTTSTENS GLLKVLLPKF EAATGVHVQV 
IAVGTGKAVK LGESGDVDVV LVHARPLEDA FVASGGGIDR RDVMYNDFIL VGPDTDPAHV
RGQKNVIQGM ETIAAAGEKA GAKFVSRGDN SGTDVMEKAY WKTANIDPKG KPWYVSAGLG
MGEVLNMAAQ MNAYTLSDRA TYGAYRAKTG LDIVLAGDPR MFNPYGIIAV NPKRYPSVNY
TDATKLIEWI TSPAGQQVIA DFKVNGEQVF FPDYGKAVAT GK