Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rpic12D_1914 |
Symbol | |
ID | 8019571 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia pickettii 12D |
Kingdom | Bacteria |
Replicon accession | NC_012856 |
Strand | + |
Start bp | 2031216 |
End bp | 2031935 |
Gene Length | 720 bp |
Protein Length | 239 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 644830698 |
Product | transcriptional regulator, TetR family |
Protein accession | YP_002981867 |
Protein GI | 241663507 |
COG category | [K] Transcription |
COG ID | [COG1309] Transcriptional regulator |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 25 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGAAACCA AGCAGCATTC CACCGGCCCG CGCCGGACGC GCGATCGCAT TCTCGAAGTG TCGCTGCGCC TGTTCAACGA ACTGGGCGAG CCCAACGTCA CCACCACGAC GATCGCCGAA GAGCTGGAGA TCAGCCCGGG CAACCTGTAC TACCACTTCC GCAACAAGGA CGACATCATC AACTCGATCT TCGTGCAGTT CGAGCAGGAG ATCGCGCGTC GTCTTAAGCT GCCGGACGAT CACAAGGCCA CACTCGACGA AACCTGGGGC TACCTGCAGT ACATGTCGGA GTTTCTCTGG AACTACCGCT TCCTGTATCG CGACATCAAC GATCTGCTCG CGCGCAACCG CATGCTTGAA CTGAACTTCA AGCGGATCGT CGAGCAGAAG CGCCACTTCG CCATGGACAT CTGCCACCAG TTCATCGAAG ACGGCGAGAT GGAAGCCACG GCCGAGCAGG TCGACGTCAT CTGCACCAAT ATCGTGGTGA TTGCCACCTA CTGGCTGTCG TTCCAGTTCG TGCAGCATCC GCGCCAGTAC AACGACCAGA ACGCGATCCG TGACCACCTG CACGGCGCGA GCTACCACAT CCTGTCGATC CTCGCGCCTT ACCTGCGCGG CAAGCCCCGG CGGGCGTTTG ATTTGCTGGC GGTGAGCCGC AGCAACGATC CGCCCATCGG CGCCCCGGGC ACCCCCAGCA ACAACACCCC TGCTCAATGA
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Protein sequence | METKQHSTGP RRTRDRILEV SLRLFNELGE PNVTTTTIAE ELEISPGNLY YHFRNKDDII NSIFVQFEQE IARRLKLPDD HKATLDETWG YLQYMSEFLW NYRFLYRDIN DLLARNRMLE LNFKRIVEQK RHFAMDICHQ FIEDGEMEAT AEQVDVICTN IVVIATYWLS FQFVQHPRQY NDQNAIRDHL HGASYHILSI LAPYLRGKPR RAFDLLAVSR SNDPPIGAPG TPSNNTPAQ
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