| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpic12D_1906 |
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| Symbol | |
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| ID | 8019563 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia pickettii 12D |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012856 |
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| Strand | + |
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| Start bp | 2024747 |
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| End bp | 2025313 |
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| Gene Length | 567 bp |
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| Protein Length | 188 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 644830690 |
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| Product | RNA polymerase factor sigma-70 |
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| Protein accession | YP_002981859 |
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| Protein GI | 241663499 |
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| COG category | [K] Transcription |
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| COG ID | [COG1595] DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog |
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| TIGRFAM ID | [TIGR02937] RNA polymerase sigma factor, sigma-70 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.0498239 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 26 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGGCCTCTG AACAGGAACT GTCGGCCTTT CTCCTAAGCG TCGAGAAACG CGCCTTCAAG
CAGGCGGTCT TCGCGGTGCG CGATGACGAT GCCGCGCTCG ATATCGTGCA GGACGCCATG
ATCAAGCTGG CCGAGAAATA CGGCGACAAG CCGGGGGCCG AGCTCCCCCT GCTGTTTCAG
CGCATTCTGC AGAATACGAT TCATGACTGG TTTCGCCGCT CCAAGGTGCG CAACACGTGG
GTGAGCCTGT TTTCCAGCTT CCGCACGGAC GCCGAGGGCG ACGACACCGA CCCGCTTGAA
CTGATCGAAA GCGAAGCCGG CACCACAGCG GCGGAAAGCA GTGCTGACAA GGTCGAGCGA
TCGCAGATGC TGGAAATCCT GGAACGCGAA ATCGAGAAAC TCCCCACGCG TCAACGGGAG
GCGTTCCTGA TGCGTTACTG GGAGGACATG GATGTTGCCG AGACGGCCCA GGCGATGGGC
TGTTCCGAGG GCAGTGTAAA GACGCACTGC TCGCGGGCAA CACACGCCCT GGCCCAAGCG
CTGCGGGCGC GAGGGATCCG ACTATGA
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| Protein sequence | MASEQELSAF LLSVEKRAFK QAVFAVRDDD AALDIVQDAM IKLAEKYGDK PGAELPLLFQ
RILQNTIHDW FRRSKVRNTW VSLFSSFRTD AEGDDTDPLE LIESEAGTTA AESSADKVER
SQMLEILERE IEKLPTRQRE AFLMRYWEDM DVAETAQAMG CSEGSVKTHC SRATHALAQA
LRARGIRL
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