| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpic12D_1905 |
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| Symbol | |
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| ID | 8019562 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia pickettii 12D |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012856 |
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| Strand | - |
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| Start bp | 2022630 |
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| End bp | 2024387 |
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| Gene Length | 1758 bp |
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| Protein Length | 585 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 644830689 |
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| Product | acetolactate synthase 3 catalytic subunit |
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| Protein accession | YP_002981858 |
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| Protein GI | 241663498 |
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| COG category | [E] Amino acid transport and metabolism
[H] Coenzyme transport and metabolism |
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| COG ID | [COG0028] Thiamine pyrophosphate-requiring enzymes [acetolactate synthase, pyruvate dehydrogenase (cytochrome), glyoxylate carboligase, phosphonopyruvate decarboxylase] |
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| TIGRFAM ID | [TIGR00118] acetolactate synthase, large subunit, biosynthetic type |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.239635 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 26 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAATATGC CAAGCGCGGA ATTTTCCCAC GCCAATAGCG GTTCATCTGC CGACATGATG
GGGGCTGACA TCCTCGTCAA TGCGCTCGCG GCAGAAGGCG TCGAGTTCGT CTGGGGGTAT
CCCGGCGGCG CGGTGCTCTA TATCTACGAC GCGTTCTACA AGCAAAACAA GATCGAACAC
ATCCTGGTGC GCCATGAACA GGCGGCAGTC CATGCGGCTG ACGGCTATGC GCGCGCCACG
GGCAAGGTCG GTGTAGCCCT GGTGACGTCC GGCCCGGGCG TGACCAATGC CGTGACCGGC
ATCGCCACCG CTTACCTGGA TTCGATCCCG ATGGTGATCA TCACCGGTAA CGTGCCGACG
CACGCCATCG GCCAGGATGC CTTCCAGGAG TGCGACACCG TCGGCATTAC CCGCCCGATC
GTCAAGCACA ACTTCCTGGT CAAGGACGTG CGCAACCTCG CCTCGACCAT CAAGAAGGCG
TTCTACATCG CCGCAACGGG TCGTCCGGGC CCGGTGGTGG TGGATATCCC CAAGGATGTC
TCGCGCGAGC TCTGCAAGTA CGAATATCCG AAGACCATCG AGATGCGCTC GTACAGCCCG
GTCAACAAGG GGCATTCGGG GCAGATTCGG AAGGCAGTGA GCCTGCTGCT GCAGGCTGAG
CGTCCGTATA TCTATTCGGG CGGCGGCGTG GTGCTCGCCG AGGCCAGCGA AGAGCTGCGC
CAGTTGGCTG CGCTGACCGG TTACCCCGTG ACGAACACGC TGATGGGCCT GGGTGCATTC
CCGGGCACCA GCAAGCAGTT CGTGGGCATG CTTGGCATGC ACGGCACGTA CGAAGCCAAC
ATGGCGATGC AGAACTGCGA CGTTCTCATT GCCATTGGCG CGCGATTCGA TGATCGCGTG
ATCGGCAGCC CGGCGCACTT CACCTCGCAG CCGCGCAAGA TCATCCACAT CGACATCGAT
CCGTCCTCCA TTTCGAAGCG GGTGAAGGTC GACATCCCCA TCGTCGGCAA CGTTAAGGAC
GTGCTGCAGG AGATGATTGC CCAGATCCAG TCTGGCGAAG CCAAGCCGAA CAAGACGGCG
CTGGCCAAGT GGTGGGAGCA GATCGAACAG TGGCGCAGTG TCGACTGCCT GAAGTACGAC
CGCACCTCCG AGATCATCAA GCCGCAGTAC GTGGTCGAGA AGATCTGGGA ACTGACCCAT
GGCGACGCGT TCATCTGCTC CGACGTCGGT CAGCATCAAA TGTGGGCGGC GCAGTTCTAC
AAGTTCAACG AGCCGCGCCG CTGGATCAAC TCCGGTGGTC TGGGCACGAT GGGTGTCGGC
CTGCCTTACG CGATGGGTAT CAAGAAGGCG TTCCCGGACA AGGAAGTCGT CACCATTACG
GGTGAGGGCT CGATCCAGAT GTGTATCCAG GAACTGTCGA CCTGCCTGCA GTACGACACG
CCAGTGAAGA TCTGCTCGCT CAACAACGGT TACCTCGGCA TGGTCCGCCA GTGGCAGGAA
ATCGAGTACG ACAACCGCTA CTCGCATTCC TACATGCAGG CGCTGCCCGA CTTCGTGAAG
CTGGCCGAAT CGTATGGTCA CGTCGGCATG CGCATCGAAA AGACGTCTGA CGTCGAGCCC
GCGCTGCGCG AGGCCTTCCG ACTCAAGGAT CGCACCGTGT TCCTCGACTT CCAGACCGAC
CCGACAGAAA ACGTCTGGCC GATGGTTCAG GCAGGTAAGG GTATTTCTGA AATGCTGCTC
GGCGCGGAGG ACCTCTAA
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| Protein sequence | MNMPSAEFSH ANSGSSADMM GADILVNALA AEGVEFVWGY PGGAVLYIYD AFYKQNKIEH
ILVRHEQAAV HAADGYARAT GKVGVALVTS GPGVTNAVTG IATAYLDSIP MVIITGNVPT
HAIGQDAFQE CDTVGITRPI VKHNFLVKDV RNLASTIKKA FYIAATGRPG PVVVDIPKDV
SRELCKYEYP KTIEMRSYSP VNKGHSGQIR KAVSLLLQAE RPYIYSGGGV VLAEASEELR
QLAALTGYPV TNTLMGLGAF PGTSKQFVGM LGMHGTYEAN MAMQNCDVLI AIGARFDDRV
IGSPAHFTSQ PRKIIHIDID PSSISKRVKV DIPIVGNVKD VLQEMIAQIQ SGEAKPNKTA
LAKWWEQIEQ WRSVDCLKYD RTSEIIKPQY VVEKIWELTH GDAFICSDVG QHQMWAAQFY
KFNEPRRWIN SGGLGTMGVG LPYAMGIKKA FPDKEVVTIT GEGSIQMCIQ ELSTCLQYDT
PVKICSLNNG YLGMVRQWQE IEYDNRYSHS YMQALPDFVK LAESYGHVGM RIEKTSDVEP
ALREAFRLKD RTVFLDFQTD PTENVWPMVQ AGKGISEMLL GAEDL
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