| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpic12D_1901 |
|---|
| Symbol | |
|---|
| ID | 8019558 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Ralstonia pickettii 12D |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012856 |
|---|
| Strand | - |
|---|
| Start bp | 2019368 |
|---|
| End bp | 2020240 |
|---|
| Gene Length | 873 bp |
|---|
| Protein Length | 290 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 63% |
|---|
| IMG OID | 644830685 |
|---|
| Product | CDP-diacylglycerol/serine O-phosphatidyltransferase |
|---|
| Protein accession | YP_002981854 |
|---|
| Protein GI | 241663494 |
|---|
| COG category | [I] Lipid transport and metabolism |
|---|
| COG ID | [COG1183] Phosphatidylserine synthase |
|---|
| TIGRFAM ID | [TIGR00473] CDP-diacylglycerol--serine O-phosphatidyltransferase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 12 |
|---|
| Plasmid unclonability p-value | 0.635563 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 22 |
|---|
| Fosmid unclonability p-value | 0.529336 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCCCGCGT TCAACCGACG CAAGAAGCGT TTTACCGCCG GCAACGTGAC GCACCTGCGT
CCGTTGCGGC ACAACCAGCC GAGGCCGGAT GACGACGATC TTGAGATCGT GCGTCCGCGT
CGCCGCGGCA TCTATCTGCT GCCCAACGCG TTTACGACGG CTGCGCTGTT CGCCGGCTTC
TTCGCCATCG TGCAGGCGAT GAACCTGAAT TTCGAGACCG CCGCCATCGC CATCTTCGCC
GCGATGGTCC TCGATGGTAT GGACGGCCGC GTCGCTCGTA TCACCAACAC GCAAAGCGCG
TTCGGCGAGC AATACGACTC GCTGTCGGAC ATGGTGTCGT TTGGCGTGGC GCCCGCGTTG
GTCATGTACG AATGGATCCT GCGCGATCTC GGCAAGTGGG GCTGGCTCGC GGCGTTCGTG
TATTGCGCTG GCGCTGCACT GCGTCTGGCG CGATTCAACA CGAACATCGG GTCGGTCGAC
AAACGCTTCT TCCAGGGCAT GCCGAGTCCG GCAGCCGCGG CGCTCATCGC GGGTTTCGTC
TGGCTCGCGA TCGACAACAA ACTGCCGGTC AAAGAACTAT GGATGCCGTG GGTGGCCTTC
GGGCTGACGC TGTATGCAGG GCTGTCGATG GTGTCGAACG CGCCGTTCTA CAGCGGCAAG
GCGCTCGACG TTCGTCACCG TGTGCCGTTC GGCGTGATGG TGCTGGTGCT GGTGTTGTTT
GTGGTCATAT CGAGCGATCC GCCGGTCGCG CTGTTTGGTC TGTTTGTTGG TTACGCGGTA
TCGGGCTACC TGCTGTGGGG CTGGCGTGCG CTGCATGGGC AACAAGGTAG CCCGCGCTTG
CCGAAACAGG CGCAAGATGC TGCGCATGAG TGA
|
|---|
| Protein sequence | MPAFNRRKKR FTAGNVTHLR PLRHNQPRPD DDDLEIVRPR RRGIYLLPNA FTTAALFAGF
FAIVQAMNLN FETAAIAIFA AMVLDGMDGR VARITNTQSA FGEQYDSLSD MVSFGVAPAL
VMYEWILRDL GKWGWLAAFV YCAGAALRLA RFNTNIGSVD KRFFQGMPSP AAAALIAGFV
WLAIDNKLPV KELWMPWVAF GLTLYAGLSM VSNAPFYSGK ALDVRHRVPF GVMVLVLVLF
VVISSDPPVA LFGLFVGYAV SGYLLWGWRA LHGQQGSPRL PKQAQDAAHE
|
|---|
| |