| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpic12D_1898 |
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| Symbol | |
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| ID | 8019555 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia pickettii 12D |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012856 |
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| Strand | - |
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| Start bp | 2015379 |
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| End bp | 2016638 |
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| Gene Length | 1260 bp |
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| Protein Length | 419 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 644830682 |
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| Product | transporter signal peptide protein |
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| Protein accession | YP_002981851 |
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| Protein GI | 241663491 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0683] ABC-type branched-chain amino acid transport systems, periplasmic component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 0.460535 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGTGTTTC GTTGGTTTGT GGCCGCGCTG GCGGCCGTTG GGTTGTGTGG GACAGCAGGT
GCCCAGCCCG AAGCCGCGCC GATCCGGCTG GCGCTGATTG AAGGTCTTTC AGGCCCGTTT
GCCAACGCGG GCGAGGCAGT CGAGCGCAAT CTGCGCATGG CGATCGAGGG CGTGAATGCG
CGCGGCGGTG TGAAGTTGCC CGACGGCATG CATCCGCTTG CCCTTGTGCG CTTTGATAGC
AAGAACAGTG TCGACGAGTC GTTGCTGCAG TTGCAGGCCG CGACGGATGC GGGCATCCGC
TTTGTGCTGC AGGGCAACAG TTCGGCGGCA GCGGCGGCGT TGTCGACGTC GATCTCGCGC
TACAACGAGC GTCATCCGGG CGCGCGCGTG CTGTTTCTGA ACTACGCCGC CGTCGATCCC
GCGCTGACCA ACGAAGCATG CAGCTTCTGG CATTTCCGCT TTGATGCATC GGCCGACATG
CGTATGCACG CGCTCACGGA AGTGATTCGC GCGGACAAGG CCGTCAAAAG GGTCTACCTG
ATCGGGCAGG ACTACACATT CGGCCGCCAG GTGGCGCAAC TGGCGCGGCA GCAGTTGAGC
GAGAAGCGGC CGGACGTCGC AGTCGTTGGT GAGGTGTTGC ACCCCATCGG CAAGGTGAAG
GATTTTGCGC CGTACGTGGC GCGCATTGCT GCCTCGGGTG CGGATACGGT CATCACCGGC
AACTGGGGTA ATGATTTGAC GCTGCTCGTC AAGGCGGCAC GGGATGCCGG ACTGAAGGCG
CGGTTCTTCA CGTTCTATGG CAACTCGCTG GGGGCGCCAG GTGCGATGGG CGACGCAGGC
GTTGGCCGTG TGGTGGCGGT CGCGGAATGG CATCCGAATT TGGGCGGCGC CAAGTCCGAC
GCGTTCTACA AGGCCTTCCG CGCCCGCTAT CCCGCCCCCG CCGACGACTA CCCGCTGCTG
CGTGACCAGA TGATGGTGGA GATGCTGGCG GCGGCCATCA CCACAGCGGG AACCACGGAA
GCTGCCGCCG TCGCACGTGC GCTGGAGGGC GCTTCTTTGG ACAACGGCTT CCACCGCATC
ACGCTGCGGC CCGAGGATCA TCAAGCCATC CAGCCCCTTG TCGTCACGCA GATGGAGCGG
ACGGGCACGC CCGGTGTGCC TTTCGATATC GAGGGCTCCG GCTACGGGTT TCGTACGTTG
AAAGTGATCT CGGAAGCTCA AACAGCCCTG CCAACGACGT GCAAGATGGC GCGCCATTGA
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| Protein sequence | MVFRWFVAAL AAVGLCGTAG AQPEAAPIRL ALIEGLSGPF ANAGEAVERN LRMAIEGVNA
RGGVKLPDGM HPLALVRFDS KNSVDESLLQ LQAATDAGIR FVLQGNSSAA AAALSTSISR
YNERHPGARV LFLNYAAVDP ALTNEACSFW HFRFDASADM RMHALTEVIR ADKAVKRVYL
IGQDYTFGRQ VAQLARQQLS EKRPDVAVVG EVLHPIGKVK DFAPYVARIA ASGADTVITG
NWGNDLTLLV KAARDAGLKA RFFTFYGNSL GAPGAMGDAG VGRVVAVAEW HPNLGGAKSD
AFYKAFRARY PAPADDYPLL RDQMMVEMLA AAITTAGTTE AAAVARALEG ASLDNGFHRI
TLRPEDHQAI QPLVVTQMER TGTPGVPFDI EGSGYGFRTL KVISEAQTAL PTTCKMARH
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