Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rpic12D_1893 |
Symbol | tpiA |
ID | 8019550 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia pickettii 12D |
Kingdom | Bacteria |
Replicon accession | NC_012856 |
Strand | - |
Start bp | 2009532 |
End bp | 2010278 |
Gene Length | 747 bp |
Protein Length | 248 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 644830677 |
Product | triosephosphate isomerase |
Protein accession | YP_002981846 |
Protein GI | 241663486 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG0149] Triosephosphate isomerase |
TIGRFAM ID | [TIGR00419] triosephosphate isomerase |
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Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 0.0274896 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 26 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGAACGCAA GACCGAAGCT GGTGGTGGGG AACTGGAAGC TGCATGGCAG CCTGAGCACG AACGCCGCGC TGCTTGAGCA GATCAAGGCC GCAGGCAAAA CCGCCGCCAC GCTGGCGGTA TGTGCGCCGT TTCCGTACCT GGCGCAGTGC CAGTCGCTGC TCGCCGGTTC TGCGGTGGCA TGGGGTGCAC AGGATGTTTC GGCTGAAGCG CGCGGCGCCT TTACGGGCGA AGTGGCGGCG TCGATGTTGT CGGAATTCGG TTGCGGCTAC GTGATCGTTG GGCACTCCGA GCGTCGGTCG TACCACGGTG AAACCGACGC GCAAGTGGCG GCCAAGGCCC TGCGCGCGCT CGAACACGGC ATCACACCGA TCGTCTGTGT GGGCGAAACG CTTGCGCAGC GCGAAGCCGG TGAGACCGAG CAGGTGGTGG GCCGGCAACT GGATGCGGTG CTGGAGGCGC TGTCGGTGGA GCAACTGGGT CGTATTGTTG TGGCTTACGA GCCGGTCTGG GCCATCGGCA CAGGCAAGAC CGCATCCAGC GAGCAGGCGC AGGCTGTGCA TGCGTTCCTT CGAGCGCGCG TCGCCGCCCG TGACGCTGGT GTGGCGCAGC GCCTGGCAAT TCTGTATGGC GGAAGCGTCA AGCCCGACAA TGCCGGCGAA CTGTTTGCAA TGGCGGACAT CGATGGTGGC CTGATCGGCG GCGCCTCCCT GAAGGCCGAA GATTTCCTGG CGATCGGTCG CGCATAA
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Protein sequence | MNARPKLVVG NWKLHGSLST NAALLEQIKA AGKTAATLAV CAPFPYLAQC QSLLAGSAVA WGAQDVSAEA RGAFTGEVAA SMLSEFGCGY VIVGHSERRS YHGETDAQVA AKALRALEHG ITPIVCVGET LAQREAGETE QVVGRQLDAV LEALSVEQLG RIVVAYEPVW AIGTGKTASS EQAQAVHAFL RARVAARDAG VAQRLAILYG GSVKPDNAGE LFAMADIDGG LIGGASLKAE DFLAIGRA
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