Gene Rpic12D_1893 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic12D_1893 
SymboltpiA 
ID8019550 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12D 
KingdomBacteria 
Replicon accessionNC_012856 
Strand
Start bp2009532 
End bp2010278 
Gene Length747 bp 
Protein Length248 aa 
Translation table11 
GC content65% 
IMG OID644830677 
Producttriosephosphate isomerase 
Protein accessionYP_002981846 
Protein GI241663486 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG0149] Triosephosphate isomerase 
TIGRFAM ID[TIGR00419] triosephosphate isomerase 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0274896 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAACGCAA GACCGAAGCT GGTGGTGGGG AACTGGAAGC TGCATGGCAG CCTGAGCACG 
AACGCCGCGC TGCTTGAGCA GATCAAGGCC GCAGGCAAAA CCGCCGCCAC GCTGGCGGTA
TGTGCGCCGT TTCCGTACCT GGCGCAGTGC CAGTCGCTGC TCGCCGGTTC TGCGGTGGCA
TGGGGTGCAC AGGATGTTTC GGCTGAAGCG CGCGGCGCCT TTACGGGCGA AGTGGCGGCG
TCGATGTTGT CGGAATTCGG TTGCGGCTAC GTGATCGTTG GGCACTCCGA GCGTCGGTCG
TACCACGGTG AAACCGACGC GCAAGTGGCG GCCAAGGCCC TGCGCGCGCT CGAACACGGC
ATCACACCGA TCGTCTGTGT GGGCGAAACG CTTGCGCAGC GCGAAGCCGG TGAGACCGAG
CAGGTGGTGG GCCGGCAACT GGATGCGGTG CTGGAGGCGC TGTCGGTGGA GCAACTGGGT
CGTATTGTTG TGGCTTACGA GCCGGTCTGG GCCATCGGCA CAGGCAAGAC CGCATCCAGC
GAGCAGGCGC AGGCTGTGCA TGCGTTCCTT CGAGCGCGCG TCGCCGCCCG TGACGCTGGT
GTGGCGCAGC GCCTGGCAAT TCTGTATGGC GGAAGCGTCA AGCCCGACAA TGCCGGCGAA
CTGTTTGCAA TGGCGGACAT CGATGGTGGC CTGATCGGCG GCGCCTCCCT GAAGGCCGAA
GATTTCCTGG CGATCGGTCG CGCATAA
 
Protein sequence
MNARPKLVVG NWKLHGSLST NAALLEQIKA AGKTAATLAV CAPFPYLAQC QSLLAGSAVA 
WGAQDVSAEA RGAFTGEVAA SMLSEFGCGY VIVGHSERRS YHGETDAQVA AKALRALEHG
ITPIVCVGET LAQREAGETE QVVGRQLDAV LEALSVEQLG RIVVAYEPVW AIGTGKTASS
EQAQAVHAFL RARVAARDAG VAQRLAILYG GSVKPDNAGE LFAMADIDGG LIGGASLKAE
DFLAIGRA