Gene Rpic12D_1890 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic12D_1890 
Symbol 
ID8019546 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12D 
KingdomBacteria 
Replicon accessionNC_012856 
Strand
Start bp2007831 
End bp2008313 
Gene Length483 bp 
Protein Length160 aa 
Translation table11 
GC content62% 
IMG OID644830673 
ProductNADH dehydrogenase subunit B 
Protein accessionYP_002981843 
Protein GI241663483 
COG category[C] Energy production and conversion 
COG ID[COG0377] NADH:ubiquinone oxidoreductase 20 kD subunit and related Fe-S oxidoreductases 
TIGRFAM ID[TIGR01957] NADH-quinone oxidoreductase, B subunit 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0103149 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCGATCG AAGGCGTACT CAACGAAGGC TTTGTCACGA CAACCGCTGA CAAGCTGATC 
AATTGGACCC GTACCGGGTC CCTGTGGCCG ATGACGTTCG GTCTGGCGTG CTGTGCTGTG
GAAATGATGC ATGCCGGCGC GTCGCGTTAT GACCTGGACC GTTTCGGCGT GGTGTTTCGT
CCGTCGCCGC GTCAGTCTGA CGTGATGATC GTGGCCGGGA CACTGTGCAA CAAGATGGCG
CCTGCACTGC GCAAGGTGTA CGACCAGATG GCCGAGCCTC GCTGGGTCAT CTCCATGGGC
TCGTGCGCGA ATGGCGGCGG TTACTACCAC TACTCGTATT CTGTCGTTCG CGGCTGCGAT
CGCATCGTGC CGGTCGATGT GTACGTGCCG GGCTGCCCGC CCACGGCTGA AGCGCTGATC
TACGGCATCA TCCAGCTGCA GGCCAAGATC CGTCGCACCA ACACCATCGC GCGCAAGGCC
TGA
 
Protein sequence
MAIEGVLNEG FVTTTADKLI NWTRTGSLWP MTFGLACCAV EMMHAGASRY DLDRFGVVFR 
PSPRQSDVMI VAGTLCNKMA PALRKVYDQM AEPRWVISMG SCANGGGYYH YSYSVVRGCD
RIVPVDVYVP GCPPTAEALI YGIIQLQAKI RRTNTIARKA