| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpic12D_1888 |
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| Symbol | |
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| ID | 8019544 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia pickettii 12D |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012856 |
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| Strand | - |
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| Start bp | 2005960 |
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| End bp | 2007213 |
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| Gene Length | 1254 bp |
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| Protein Length | 417 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 644830671 |
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| Product | NADH dehydrogenase subunit D |
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| Protein accession | YP_002981841 |
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| Protein GI | 241663481 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG0649] NADH:ubiquinone oxidoreductase 49 kD subunit 7 |
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| TIGRFAM ID | [TIGR01962] NADH dehydrogenase I, D subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.187802 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 25 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCAGATA TCAAGAACTA CACCCTGAAC TTCGGTCCGC AACACCCGGC CGCGCACGGC
GTGCTGCGCC TTGTGCTTGA GCTGGACGGC GAAGTCATTC AACGTGCCGA CCCGCACATC
GGTCTGCTGC ATCGCGCGAC GGAAAAGCTC GCCGAACAGA AGACCTGGAT TCAAAGCGTG
CCGTACATGG ACCGTCTCGA CTACGTGTCG ATGATGGTCA ACGAGCACGC CTACGTGATG
GCAATCGAGC GCCTGCTGGG TCTCGAGGTG CCGCTGCGCG CCCAGTACAT CCGCGTCATG
TTCGACGAGA TCACGCGGAT CATGAATCAC CTGATGTGGA TCGGTTCGCA CGCGCTGGAC
GTGGGCGCCA TGGCGGTGTT CCTGTACGCC TTCCGCGAGC GCGAAGATCT GTTCGATATG
TACGAGGCGG TGTCAGGCGC GCGCATGCAC GCAGCCTACT ACCGTCCGGG CGGCGTGTAT
CGCGACCTGC CCGACACGAT GCCGCAATAC AAGGCATCCA AGGTGCGCAA CGAGAAGGCC
TTGGCCGCCC TGAACGAAAC GCGTTCGGGC TCGCTGCTGG ACTTCATTGA AGACTTTACC
AACCGCTTCC CGAAGTACGT TGACGAATAC GAAACGCTGC TGACGGACAA CCGGATTTGG
AAGCAGCGCC TGGTTGGCAT CGGCGTGGTG AGCCCGGAGC GCGCACTGAA CAAGGGCTTC
TCGGGTGCGA TGCTGCGTGG TTCTGGCATC GAATGGGATG TGCGCAAGAA GCAGCCGTAC
GAGGTGTACG ACCGCATCGA TTTCGATATC CCGGTTGGCG TGAACGGCGA TTGCTACGAC
CGTTATCTGG TGCGCGTGGA AGAAATGCGC CAGAGCAATC GCATCATCCG TCAGTGCATC
GAGTGGCTGC GCAAGAACCC GGGTCCGGTG ATCACCGATA ACCACAAGGT GGCGCCTCCG
TCGCGCGTGG ACATGAAGAC CAACATGGAA GAGCTGATTC ACCACTTCAA GCTCTTCACC
GAAGGTATGC ACGTGCCCGA AGGCGAGGCG TATGCCGCCG TTGAGCACCC GAAGGGCGAA
TTCGGCATTT ATGCCATCTC CGACGGCGCC AACAAGCCGT ACCGTCTGAA GATCCGCGCA
CCGGGCTTCG TTCATCTGGC CGCGCTCGAC GAAATGGCGA AGGGTCACAT GATTGCCGAT
GCCGTCACGA TCATCGGTAC GCAGGACATC GTGTTTGGCG AGATCGATCG CTGA
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| Protein sequence | MADIKNYTLN FGPQHPAAHG VLRLVLELDG EVIQRADPHI GLLHRATEKL AEQKTWIQSV
PYMDRLDYVS MMVNEHAYVM AIERLLGLEV PLRAQYIRVM FDEITRIMNH LMWIGSHALD
VGAMAVFLYA FREREDLFDM YEAVSGARMH AAYYRPGGVY RDLPDTMPQY KASKVRNEKA
LAALNETRSG SLLDFIEDFT NRFPKYVDEY ETLLTDNRIW KQRLVGIGVV SPERALNKGF
SGAMLRGSGI EWDVRKKQPY EVYDRIDFDI PVGVNGDCYD RYLVRVEEMR QSNRIIRQCI
EWLRKNPGPV ITDNHKVAPP SRVDMKTNME ELIHHFKLFT EGMHVPEGEA YAAVEHPKGE
FGIYAISDGA NKPYRLKIRA PGFVHLAALD EMAKGHMIAD AVTIIGTQDI VFGEIDR
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