Gene Rpic12D_1883 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic12D_1883 
Symbol 
ID8019539 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12D 
KingdomBacteria 
Replicon accessionNC_012856 
Strand
Start bp2000096 
End bp2000587 
Gene Length492 bp 
Protein Length163 aa 
Translation table11 
GC content60% 
IMG OID644830666 
ProductNADH dehydrogenase subunit I 
Protein accessionYP_002981836 
Protein GI241663476 
COG category[C] Energy production and conversion 
COG ID[COG1143] Formate hydrogenlyase subunit 6/NADH:ubiquinone oxidoreductase 23 kD subunit (chain I) 
TIGRFAM ID[TIGR01971] NADH-quinone oxidoreductase, chain I 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value0.604396 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTGCTTG CCATCAAGGA ATTCTTTAAC AGCCTGCTCC TGAAGGAACT CTTCAAGGGG 
CTGGCGCTGA CCGGGCGCTA CCTGTTTGCG CGCAAGATCA CCGTTCTCTT TCCGGAAGAG
AAGACGCCGC TGTCGCCGCG CTTTCGCGGT CTGCATGCAC TGCGTCGCTA TCCGAACGGC
GAAGAGCGCT GCATTGCGTG CAAGCTGTGC GAAGCCGTTT GCCCGGCTCT GGCCATCACG
ATTGAGTCGG ATCAGCGTGA CGACGGCACC CGCCGCACCA CGCGCTACGA CATCGACCTG
ACGAAGTGTA TTTTCTGCGG CTTCTGTGAA GAGGCTTGTC CGGTGGACGC CATCGTCGAG
ACGCACATCC TCGAATACCA CGGTGAAAAG CGCGGCGACC TGTATTTCAC CAAAGACATG
CTGCTGGCCG TGGGGGATCG CTTCGAGCCG GAAATCGCGG CCAACAAAGC GGCCGACGCA
AAGTACCGCT GA
 
Protein sequence
MLLAIKEFFN SLLLKELFKG LALTGRYLFA RKITVLFPEE KTPLSPRFRG LHALRRYPNG 
EERCIACKLC EAVCPALAIT IESDQRDDGT RRTTRYDIDL TKCIFCGFCE EACPVDAIVE
THILEYHGEK RGDLYFTKDM LLAVGDRFEP EIAANKAADA KYR