| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpic12D_1880 |
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| Symbol | |
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| ID | 8019536 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia pickettii 12D |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012856 |
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| Strand | - |
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| Start bp | 1996897 |
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| End bp | 1998957 |
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| Gene Length | 2061 bp |
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| Protein Length | 686 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 644830663 |
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| Product | NADH dehydrogenase subunit L |
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| Protein accession | YP_002981833 |
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| Protein GI | 241663473 |
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| COG category | [C] Energy production and conversion
[P] Inorganic ion transport and metabolism |
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| COG ID | [COG1009] NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ antiporter, MnhA subunit |
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| TIGRFAM ID | [TIGR01974] proton-translocating NADH-quinone oxidoreductase, chain L |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.835925 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 24 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCTACCA CGCTCAATCC CAACCTGCTG CTGGCGATCC CGCTCGCGCC GCTGGCCGGC
GCGGCGATCG CCGGGCTGTT CGGCACCAAG TTCTTTGGTG AGAAGATCGG CCGCACGGCA
TCCCACAGCG TCACCATCCT CGGTGTTGCG ATCGCCTTCA TTCTGTCTGC GCTGACGCTG
TCTGACGTCA TCAATGGTGC TGGCTACAAC GGCACCGTTT ATGAATGGAT GACCGTTGGC
ACGCTCAAGA TGGAAGTCGG TTTCCTCATC GATTCGCTGA CGGCGATGAT GATGTGCGTG
GTGACTTTCG TCTCGCTCAT GGTGCACATC TACACCATCG GCTACATGGC GGAAGACGAC
GGCTACAACC GTTTCTTCGC ATACATCTCG CTGTTTACGT TCTCGATGTT GATGCTCGTG
ATGAGCAACA ACTTCCTGCA ACTGTTCTTC GGCTGGGAAG CCGTGGGCCT GGTGTCGTAC
CTGCTGATCG GTTTCTGGTT CAAGCGCCCG ACGGCCATCT ACGCCAACAT GAAGGCGTTC
CTGGTCAACC GCGTGGGTGA CTTTGGTTTC GTTCTCGGCA TCGGCCTGTT GCTCGCCTAC
AGCGGTAGCC TCAGCTATGC CGACGTGTTC GCCGCCCGCG ACAACCTGGC CACGATCGGC
TTTCCGGGTA CCGACTGGCA CATGCTGACG GTCGCCTGTA TCTGCCTGTT TATCGGCGCG
ATGGGTAAAT CGGCCCAATT CCCCCTGCAC GTGTGGCTGC CGGACTCGAT GGAAGGCCCG
ACCCCGATTT CCGCACTGAT TCACGCGGCC ACCATGGTGA CCGCCGGTAT CTTCATGGTC
GCGCGCATGT CGCCGCTGTT CGAGCTGTCG GATACCGCGC TGTCGTTCGT GCTGATTATC
GGCGCCATCA CGGCGCTGTT CATGGGCTTC CTGGGCATCA TCCAGACCGA CATCAAGCGT
GTGGTCGCGT ATTCCACGCT GTCTCAGCTC GGCTACATGA CCGTCGCGCT GGGCGCATCG
GCGTACCAAG TGGCCGTGTT CCACCTGATG ACGCATGCGT TCTTCAAGGC ACTGCTGTTC
TTGGGTGCGG GCTCGGTCAT CATCGGCATG CATCACGATC AGGACATGCG GAACATGGGC
GGCCTGCGCA AGTACATGCC GATTACGTGG CTCACTTCGC TGGTAGGGTC GCTGGCGCTG
ATCGGTACGC CGTTCTTCTC GGGCTTCTAT TCGAAGGACT CGATCATCGA AGCGGTTCGT
GAATCGCACC TGCCGGGTGC CGGTTTCGCT TACTGGGCGG TGCTGGCTGG CGTGTTCGTG
ACCGCGTTCT ACTCGTTCCG AATGTATTTC CTGGTGTTTC ACGGTGAAGA ACGTTTTGGC
AAGGCTCACG CCCCCCACGA CGACCACCAT GAAGAGGAAG AGGGCGACCA TGATCACCAT
CATGGGCTGG TTCCGGGCCA AAAGCCGCAC GAGTCGCCGT GGGTGGTGAC GGTACCGCTG
GTTTTGCTGG CAATTCCGTC GGTCATCATC GGTGCTTGGG CGATTCAGCC GATGCTGTTC
GGCGAGTTCT TCAAGCACGG TGTGGTGTTC TCGGAAGTCA TCTTCAACAG CGAGAACCAT
GAAGCGATGA AGGTGCTGGC CGAAGACTTC CACGGCTGGG TGGCGATGGC GCTGCATGGC
TTTACGTCTG CACCGTTCAT TCTGCTGGTG TCGGGTGTCG TGCTGTCGTG GTTCTTCTAC
TTGAAGCGCC CGGATATTCC GGCGGCGATC GCCAAGCGCT TCTCCGGCGT CTACAAGCTG
CTGGACAACA AGTACTACAT GGACAAGATC AACGAGATCG TCTTTGCCAA CGGTGCGGTC
AAGTTCGGCC GAGGCCTGTG GAAGGGCGGC GATCAAGGAG TGATCGACGG TGTTGTCGTG
AACGGCAGCG CGCGTCTGGT GGGCTGGTTC GCGACGGTCG TGCGCCTGCT CCAGTCCGGC
TTCATCTATG ACTATGCGTT CGCGATGATC ATCGGCACGG TCGCGCTGCT GACGTATTTC
GTGTTCCTGG CAGGCAAATA A
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| Protein sequence | MATTLNPNLL LAIPLAPLAG AAIAGLFGTK FFGEKIGRTA SHSVTILGVA IAFILSALTL
SDVINGAGYN GTVYEWMTVG TLKMEVGFLI DSLTAMMMCV VTFVSLMVHI YTIGYMAEDD
GYNRFFAYIS LFTFSMLMLV MSNNFLQLFF GWEAVGLVSY LLIGFWFKRP TAIYANMKAF
LVNRVGDFGF VLGIGLLLAY SGSLSYADVF AARDNLATIG FPGTDWHMLT VACICLFIGA
MGKSAQFPLH VWLPDSMEGP TPISALIHAA TMVTAGIFMV ARMSPLFELS DTALSFVLII
GAITALFMGF LGIIQTDIKR VVAYSTLSQL GYMTVALGAS AYQVAVFHLM THAFFKALLF
LGAGSVIIGM HHDQDMRNMG GLRKYMPITW LTSLVGSLAL IGTPFFSGFY SKDSIIEAVR
ESHLPGAGFA YWAVLAGVFV TAFYSFRMYF LVFHGEERFG KAHAPHDDHH EEEEGDHDHH
HGLVPGQKPH ESPWVVTVPL VLLAIPSVII GAWAIQPMLF GEFFKHGVVF SEVIFNSENH
EAMKVLAEDF HGWVAMALHG FTSAPFILLV SGVVLSWFFY LKRPDIPAAI AKRFSGVYKL
LDNKYYMDKI NEIVFANGAV KFGRGLWKGG DQGVIDGVVV NGSARLVGWF ATVVRLLQSG
FIYDYAFAMI IGTVALLTYF VFLAGK
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