| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpic12D_1869 |
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| Symbol | |
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| ID | 8019525 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia pickettii 12D |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012856 |
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| Strand | - |
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| Start bp | 1985584 |
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| End bp | 1987215 |
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| Gene Length | 1632 bp |
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| Protein Length | 543 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 644830652 |
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| Product | urea ABC transporter, permease protein UrtB |
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| Protein accession | YP_002981822 |
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| Protein GI | 241663462 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0559] Branched-chain amino acid ABC-type transport system, permease components |
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| TIGRFAM ID | [TIGR03409] urea ABC transporter, permease protein UrtB |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.180379 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 0.303887 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATGCGCT TGTCCCGCTG GTGGTTTCAT TCTCTTGCCG CACTGCTGTG CGCTTTCTGT
CTGGCTGCGA CGCCCCAAGG CCTTGCGTGG GCCGCCGGAC AACCCCTGAC CCAGGCCGAT
CTCAAGCCGC TGGCCGAAGA CGACTTCGAC GCCAAGGTCA AGACCCTCAA CGCGCTGACC
GCCGCGCCGG CTGAACAAGC CGGGCCGATC CTGCAAGCCC TGCAAAATGA CGCGCTGTTC
CTCGCGCCCG CCGTCGGCAT GGTGCGTCAG GACGGCGAGA AGTACCTGGA CGCAATCACT
GGCCAGCCGG TCACCGTCAA GGCCGACGAC CTGCAGTCCC TGACTTTGAA CAATGCCCTG
CGTGCGCAAG TGGACAGCGC GGCGAGCGGC TTCGTGCTGC AATCGCCCGA TCGTGCCGTG
CGCGCGCAGG CCGTCGATAC GTTGCTTGCG CATCCCGAGA CGGCGTCGCG CCCCATTGTC
GACGCGGCGC GCAAGCATGA AACCGACCCG GAGTTGCGCA GCAAGCTGCA TGTGCTCTGG
GCCAATCTCG CGCTCGACGA CGGTACGCAT GCCGAGAAGC TCGAAGCGCT CAAGCTGCTT
GCGGGCGATA CCAACCCGCA GACGCGCCAG CGCATCGCCC CGTTGCTTGC CAAGGACAGC
GGCGCCGACG ATGAACTGCG CGCCGCGGCC CAACAGGCGC TCGACGGCCT CGCCGCGCAG
CAACGCAAGG CCGAGCTGGT CGGCAACCTG TTTGCGGGGC TGAGCCTCGG CTCGGTGCTG
CTGCTGGCGG CGCTTGGGCT GGCCATCACC TACGGGCTCA TCGGCGTCAT CAACATGGCG
CACGGCGAGT TCCTGATGAT CGGCGCGTAT GCCACCTACG TGGTGCAGAC GATTTTCCGC
AACTACTTTC CGAACGCGTT CGACTGGTAT CTGCCTGCGG CGCTGCCTGC TGCGTTCCTG
GCGGCGGCCG TCGTCGGCTT TGCGCTGGAG CGGCTGGTGC TGCGCCATCT GTATGGCCGC
CCGTTGGAAA CGCTGCTCGC CACCTTCGGG ATCAGCCTGC TGCTGATGCA GGCCGTGCGT
TCGATCTTCG GTGCGCAGAA CGTGGAGGTG GCGAACCCAA GCTGGATGAG CGGCGGCATT
GCGTTGTACC CGGGCCTCGT GCTGCCGTAC AACCGGCTCG TCATCCTGCT GTTTGCACTG
GCCGTGGTGG CGATCGCCTG GGCGGTGCTC AACCGAACGC GCCTGGGCCT GTTCGTGCGC
GCCACCACGC AGAACCGCAC GATGGCTGCC TGCGTTGGCG TGCGCACGTG GAAGGTCGAC
AGCTACGCGT TTGCATTCGG TGCCGGAATT GCCGGCCTGG GCGGCTGCGC ACTCTCGCAG
ATCGGCAACG TCGGGCCGGA TCTCGGCCAG AGCTACATCA TCGATTCGTT CATGGCCGTG
GTGCTGGGCG GGGTGGGGCA ACTGGCCGGC ACGATCATCG GTGCGTTCGG GCTGGGCCTC
ATCAACAAGT TCATCGAGCC GTTCTATGGC GCGGTGCTGG CGAAGATCAT CGTGCTGGTG
CTGATCGTGC TGTTCATCCA GAAGCGTCCG CAGGGCCTGT TCGCCCTCAA GGGCCGCAGC
GCCGAGGCCT GA
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| Protein sequence | MMRLSRWWFH SLAALLCAFC LAATPQGLAW AAGQPLTQAD LKPLAEDDFD AKVKTLNALT
AAPAEQAGPI LQALQNDALF LAPAVGMVRQ DGEKYLDAIT GQPVTVKADD LQSLTLNNAL
RAQVDSAASG FVLQSPDRAV RAQAVDTLLA HPETASRPIV DAARKHETDP ELRSKLHVLW
ANLALDDGTH AEKLEALKLL AGDTNPQTRQ RIAPLLAKDS GADDELRAAA QQALDGLAAQ
QRKAELVGNL FAGLSLGSVL LLAALGLAIT YGLIGVINMA HGEFLMIGAY ATYVVQTIFR
NYFPNAFDWY LPAALPAAFL AAAVVGFALE RLVLRHLYGR PLETLLATFG ISLLLMQAVR
SIFGAQNVEV ANPSWMSGGI ALYPGLVLPY NRLVILLFAL AVVAIAWAVL NRTRLGLFVR
ATTQNRTMAA CVGVRTWKVD SYAFAFGAGI AGLGGCALSQ IGNVGPDLGQ SYIIDSFMAV
VLGGVGQLAG TIIGAFGLGL INKFIEPFYG AVLAKIIVLV LIVLFIQKRP QGLFALKGRS
AEA
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