| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpic12D_1867 |
|---|
| Symbol | |
|---|
| ID | 8019523 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Ralstonia pickettii 12D |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012856 |
|---|
| Strand | - |
|---|
| Start bp | 1983565 |
|---|
| End bp | 1984416 |
|---|
| Gene Length | 852 bp |
|---|
| Protein Length | 283 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 644830650 |
|---|
| Product | urea ABC transporter, ATP-binding protein UrtD |
|---|
| Protein accession | YP_002981820 |
|---|
| Protein GI | 241663460 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG4674] Uncharacterized ABC-type transport system, ATPase component |
|---|
| TIGRFAM ID | [TIGR03411] urea ABC transporter, ATP-binding protein UrtD |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 11 |
|---|
| Plasmid unclonability p-value | 0.449649 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 20 |
|---|
| Fosmid unclonability p-value | 0.375358 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGCACGT TCACTGCACT CCCTGACCGC GCGGAGACCG GCACCGCCAC CGGCATGGGC
CATCTGGTCG AGCCGGACAC GATCGACGTC TCGCACGGCG CCATCCTGTA TCTCGAAGAC
GTGACCGTGC GCTTTGGCGG CTTTCGCGCA CTGAACGCGC TCACGCTGTC GATCGACCAC
GGCGAACTGC GCTGCATCAT CGGCCCCAAC GGCGCGGGCA AGACCACGAT GATGGACGTG
ATTACCGGCA AGACCGGGCC GCGCAATGCC GACGTGACCG GCCGCGTTTT CCTTGGCCAG
ACCATCGACC TGCTGCGCCT GACCGAGCCG CGCATCGCGC AGATCGGCAT CGGCCGCAAG
TTCCAGAAGC CGACCGTGTT CGAGCAGCAC ACCGTGTGGG AAAACCTGGA ACTGGCGATG
AAGGCCGACA AGCGCTGGTG GGTCTCGCTG CGCGCGCGCC TGCTGAACGA CGGCCGCCAG
CGCATCGAAG AAACGCTTGG TCGTATCCAT CTGGAAGCGG AGGCCTATCG GCCCGCCGGG
CTGCTCTCGC ACGGCCAGAA ACAGCGGCTG GAGATCGGCA TGCTGCTGAT GCAGCAACCG
CAACTGCTGC TGCTCGACGA ACCGGTCGCC GGCATGACGG ATGAGGAGAC GATGCAGCTC
GCAACGTTGC TCAACGGCCT GCGTGGCACG TGCTCGATCA TGGTCGTCGA GCACGACATG
GAGTTCGTCG CCGCGCTGGC AGGGGCAGAA GGGCGCGTGA CCGTGCTGGC TGAAGGCAGT
GTCCTCGCCG AAGGCACGCT CGATGCCGTC AAGCGCGATG AGCGGGTGAT CGAATCGTAT
TTAGGGCGTT GA
|
|---|
| Protein sequence | MSTFTALPDR AETGTATGMG HLVEPDTIDV SHGAILYLED VTVRFGGFRA LNALTLSIDH
GELRCIIGPN GAGKTTMMDV ITGKTGPRNA DVTGRVFLGQ TIDLLRLTEP RIAQIGIGRK
FQKPTVFEQH TVWENLELAM KADKRWWVSL RARLLNDGRQ RIEETLGRIH LEAEAYRPAG
LLSHGQKQRL EIGMLLMQQP QLLLLDEPVA GMTDEETMQL ATLLNGLRGT CSIMVVEHDM
EFVAALAGAE GRVTVLAEGS VLAEGTLDAV KRDERVIESY LGR
|
|---|
| |