Gene Rpic12D_1858 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic12D_1858 
Symbol 
ID8019514 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12D 
KingdomBacteria 
Replicon accessionNC_012856 
Strand
Start bp1976131 
End bp1976757 
Gene Length627 bp 
Protein Length208 aa 
Translation table11 
GC content63% 
IMG OID644830641 
Producturease accessory protein UreG 
Protein accessionYP_002981811 
Protein GI241663451 
COG category[K] Transcription
[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0378] Ni2+-binding GTPase involved in regulation of expression and maturation of urease and hydrogenase 
TIGRFAM ID[TIGR00101] urease accessory protein UreG 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.801773 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value0.157985 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGAACCA AGAAACTTCC TGCCCTGCGC GTTGGCGTGG GCGGCCCGGT GGGCTCCGGC 
AAGACCACGC TGCTCGAAAT GCTCTGCAAG GCCATGCGCG AGCGCTACGA CCTCGTGGCG
ATCACCAACG ACATCTACAC GAAGGAAGAT CAGCGCTTGC TGACCATCTC CGGCGCGCTG
CCCGCCGAAC GCATCATGGG CGTCGAAACC GGTGGCTGCC CGCATACGGC CATCCGCGAA
GATGCGTCGA TCAACCTTGA AGCGGTGGAT CGCATGCTCT CCAGGTTTCC CGATGCGGAT
GTCGTCTTCA TTGAGTCGGG CGGTGACAAC CTCGCAGCGA CATTCAGCCC CGAGCTGTCG
GACTTGACCA TCTATGTGAT CGACGTGGCG GGCGGGGAGA AGATCCCGCG CAAGGGCGGC
CCCGGCATCA CCAAGTCGGA CCTGCTGATC ATCAACAAGA CGGACCTGGC GCCGTACGTT
GGCGCGTCGC TGGAGGTGAT GGAAAGCGAC ACCCGCAAGA TGCGCGGCGA TCGGCCGTTC
GTGATGTGCA ATCTGCGGGC GCAGGGCGGG TTGGATGAAG TGATCCGTTT TATTGAGAAA
CAGGGGATGC TGACGGCGGC TGCCTGA
 
Protein sequence
MRTKKLPALR VGVGGPVGSG KTTLLEMLCK AMRERYDLVA ITNDIYTKED QRLLTISGAL 
PAERIMGVET GGCPHTAIRE DASINLEAVD RMLSRFPDAD VVFIESGGDN LAATFSPELS
DLTIYVIDVA GGEKIPRKGG PGITKSDLLI INKTDLAPYV GASLEVMESD TRKMRGDRPF
VMCNLRAQGG LDEVIRFIEK QGMLTAAA