Gene Rpic12D_1856 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic12D_1856 
Symbol 
ID8019512 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12D 
KingdomBacteria 
Replicon accessionNC_012856 
Strand
Start bp1975003 
End bp1975662 
Gene Length660 bp 
Protein Length219 aa 
Translation table11 
GC content65% 
IMG OID644830639 
ProductIsoprenylcysteine carboxyl methyltransferase 
Protein accessionYP_002981809 
Protein GI241663449 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG2020] Putative protein-S-isoprenylcysteine methyltransferase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value0.144827 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCAGCCT CACTCAAAAT GGGCCTCGCG GCTGCGGTGT CCATCGCGGT TTATCTCGGC 
CTTGCCGCGC TCGGTTGGGG TGGTGTGGGC GCATTCCTGG CCCATCCCGC ACGCGTCGTG
CTTGTGGTGA TCACGGTGTT GCTGGCCATC GCCGCCTTGC TTGCCGGCGG CAACCTGAGC
CCCGGAGAAC GCGAAGACCG AACCAACCGC TGGGTGCTGC CGGTGTTTGG CGTGATCGGC
TTCGCCAGTG CATGGCTGCC GGCGTATACA GACCGGCTCG ACCTCTGGTG CATCGATGGC
GATGCCGTAC GTTGGCTGGG CGTCGTGCTC TACGCCGCAG GCGGCGCGTT GCGTGTGTGG
CCGGTGTATG TGCTGGGCAA TCGATTCAGC GGACTGGTCG CGATCCAGCC CGGCCATACG
CTTGTGACCG GCGGCATCTA CCAATACGTG CGCAACCCGA GCTACCTGGG GTTGCTGATC
GGCACGCTGG GTTGGGGACT GACGTTCCGG GCACTGGCCG GTGTGGTGCT GACGCTCTTG
CTGATTCCAC CATTGGTGGC GCGCATGCGT GCAGAAGAAG CCCTCCTGCA ATCACAGTTC
GGTGCGGAGT ACGACGCCTA CCGCGCCCGG ACGTGGCGCC TCATTCCCGG CCTCTATTGA
 
Protein sequence
MAASLKMGLA AAVSIAVYLG LAALGWGGVG AFLAHPARVV LVVITVLLAI AALLAGGNLS 
PGEREDRTNR WVLPVFGVIG FASAWLPAYT DRLDLWCIDG DAVRWLGVVL YAAGGALRVW
PVYVLGNRFS GLVAIQPGHT LVTGGIYQYV RNPSYLGLLI GTLGWGLTFR ALAGVVLTLL
LIPPLVARMR AEEALLQSQF GAEYDAYRAR TWRLIPGLY