Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rpic12D_1850 |
Symbol | |
ID | 8019506 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia pickettii 12D |
Kingdom | Bacteria |
Replicon accession | NC_012856 |
Strand | + |
Start bp | 1969025 |
End bp | 1970020 |
Gene Length | 996 bp |
Protein Length | 331 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 644830633 |
Product | transcriptional regulator, LysR family |
Protein accession | YP_002981803 |
Protein GI | 241663443 |
COG category | [K] Transcription |
COG ID | [COG0583] Transcriptional regulator |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 14 |
Fosmid unclonability p-value | 0.0195634 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGATCGCCC TCGACGACCT CCGACTGCTG GTGCGCATCG CCGACGCCGG CAACCTTTCC GCCGCTGCGC GCCAGCTCGG TTGGCTGCCC GCCACCGCCA GCGCAGCGCT CAAGCGCGTG GAGACCGAAC TCGGCGCCCG CCTGTTCGAG CGCACCACGC GCAGCATGCG GCCGACCGAA GCCGGCCAGC GTTATCTAGG GTATGCAAGA CAGGCGCTGG AGGCCCTGGA CGAAGGCGCG GAAAGCCTGG GGCAGGATCG CACGGAGCTG TCCGGCCCCA TCCGCATTGC CGCCACATCA GATCTGGGTC GGCACATCCT GCGCCCCTGG CTCGACGCGT TCTGCGATGA GCACCCCGGC GTGCGGATCA CGCTGGTGCT GGGCGACCGG CTGGCCGACC TGATGCGCGA AGACCTCGAC TTTGCGCTGC GCTATGGGAA TCTGCAGGAT TCGGCGCTGG TGCGGCGGCC GTTGGCATCG CATCCGCGCG TGATCGTGGG CGCGCCGTCG TACTTCCGGC AGCATGGCCG GCCCGCACAC CCGAGCGACC TCGCCGACCA CCGCTGCCTG ATCCTCCTGC GCAACGGCGA GCCCGTCACG CGCTGGCAAC TCACGCATGC CAGCGGTCCC GCCCCGATCG ACGTGCGCGG CGGTTTCCAA TGCGACGACG GCGCCGTGGT GCGCGACTGG GCCGTCGCCG GGCGTGGCCT GGCATTCAAG TCGTGGTTGG ATGTCGCGCA AGACGTGTGC GCCGGCCGTC TGGAGGTGGT ACTGCCAGCA TGGAGCCATG CGCCTACGCC GCTGCAGCTT GTCGCCCTTG CGCGTCGCCA TCGACCGGCG CGACTGACGG CGTGTGCGGA TTTTCTCGCC GCCCGCTTTG CGGAGTTCAG CGCGCGTTAC CCGTTCCCGT CCGCACAGGC GGCAGCGGCA TCGCAAAAGC CAGCCAAGGC GGTCAAGCCG ACCAAAACTA AGCCGGCCGT CGCCGCAAAC ACGTAG
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Protein sequence | MIALDDLRLL VRIADAGNLS AAARQLGWLP ATASAALKRV ETELGARLFE RTTRSMRPTE AGQRYLGYAR QALEALDEGA ESLGQDRTEL SGPIRIAATS DLGRHILRPW LDAFCDEHPG VRITLVLGDR LADLMREDLD FALRYGNLQD SALVRRPLAS HPRVIVGAPS YFRQHGRPAH PSDLADHRCL ILLRNGEPVT RWQLTHASGP APIDVRGGFQ CDDGAVVRDW AVAGRGLAFK SWLDVAQDVC AGRLEVVLPA WSHAPTPLQL VALARRHRPA RLTACADFLA ARFAEFSARY PFPSAQAAAA SQKPAKAVKP TKTKPAVAAN T
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