Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rpic12D_1845 |
Symbol | |
ID | 8019501 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia pickettii 12D |
Kingdom | Bacteria |
Replicon accession | NC_012856 |
Strand | + |
Start bp | 1965113 |
End bp | 1965892 |
Gene Length | 780 bp |
Protein Length | 259 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 644830628 |
Product | enoyl-CoA hydratase |
Protein accession | YP_002981798 |
Protein GI | 241663438 |
COG category | [I] Lipid transport and metabolism |
COG ID | [COG1024] Enoyl-CoA hydratase/carnithine racemase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.068213 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 12 |
Fosmid unclonability p-value | 0.00498054 |
Fosmid Hitchhiker | No |
Fosmid clonability | decreased coverage |
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Sequence |
Gene sequence | ATGACCGCGC AATTGCTCTC CAAACGCATC GGCTCGACGC TGGTGCTGAC GCTGTCCAAC CCTGACGCGC GCAACGCGCT GGACCCGGTG ATGTACACCG CGTCGATGGA AGCGCTCGAC CGTGCCGCCA ACGACAACGA GATCCGTGCC GTCATCTTCA CGGGCGACGG CAACGCCTTC TGTGCGGGCG GCAATCTGAA CCGCCTGCTG GAAAACCGTA GCAAGCCGCG CAGCGTTCAA GAAGAAGGCA TCGACGCGCT CAACCAATGG ATCGAGACGA TCCGCACGTT TCCCAAGCCG GTGATCGCCG CGGTGGAGGG CCCAGCGGCA GGCGCCGGTT TCTCGTTGGT ACTGGCTTGC GACTTTGCGA TTGCCGCATC GGACGCCAAT TTCGTGATGG CATACGTGAA CGTGGCGCTC ACGCCGGACG GCGGCGGCTC ATGGCACATC GCACGCTTCC TGCCGCGCCC GTTGGCGAGC GAAATCATCA TGCTCGGCAA GCCTGTCAGC GCAGAGCGGC TGGCGCACTT CGGGCTCATC AATGAGGTGG TCAAACCCGG CGAGGCGCTG GACCAGGCAG TGGCACTGGC GGAAAAACTC GCTGCGCAAT CGCCGCACGC GGTGGGCCGC ATCAAGGGCC TGATCGCGCA CGCAGAAGAC GCCTCACTGC ACGACCACCT CAAGGCCGAG CAGCACAGCT TTGTCGAAGC GCTGCACCAC GCCGATGGCA ACGAGGGCAT CTCCGCCTTC CTGCAAAAGC GCAAACCCCA ATACCGCTAG
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Protein sequence | MTAQLLSKRI GSTLVLTLSN PDARNALDPV MYTASMEALD RAANDNEIRA VIFTGDGNAF CAGGNLNRLL ENRSKPRSVQ EEGIDALNQW IETIRTFPKP VIAAVEGPAA GAGFSLVLAC DFAIAASDAN FVMAYVNVAL TPDGGGSWHI ARFLPRPLAS EIIMLGKPVS AERLAHFGLI NEVVKPGEAL DQAVALAEKL AAQSPHAVGR IKGLIAHAED ASLHDHLKAE QHSFVEALHH ADGNEGISAF LQKRKPQYR
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