Gene Rpic12D_1845 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic12D_1845 
Symbol 
ID8019501 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12D 
KingdomBacteria 
Replicon accessionNC_012856 
Strand
Start bp1965113 
End bp1965892 
Gene Length780 bp 
Protein Length259 aa 
Translation table11 
GC content64% 
IMG OID644830628 
Productenoyl-CoA hydratase 
Protein accessionYP_002981798 
Protein GI241663438 
COG category[I] Lipid transport and metabolism 
COG ID[COG1024] Enoyl-CoA hydratase/carnithine racemase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.068213 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.00498054 
Fosmid HitchhikerNo 
Fosmid clonabilitydecreased coverage 
 

Sequence

Gene sequence
ATGACCGCGC AATTGCTCTC CAAACGCATC GGCTCGACGC TGGTGCTGAC GCTGTCCAAC 
CCTGACGCGC GCAACGCGCT GGACCCGGTG ATGTACACCG CGTCGATGGA AGCGCTCGAC
CGTGCCGCCA ACGACAACGA GATCCGTGCC GTCATCTTCA CGGGCGACGG CAACGCCTTC
TGTGCGGGCG GCAATCTGAA CCGCCTGCTG GAAAACCGTA GCAAGCCGCG CAGCGTTCAA
GAAGAAGGCA TCGACGCGCT CAACCAATGG ATCGAGACGA TCCGCACGTT TCCCAAGCCG
GTGATCGCCG CGGTGGAGGG CCCAGCGGCA GGCGCCGGTT TCTCGTTGGT ACTGGCTTGC
GACTTTGCGA TTGCCGCATC GGACGCCAAT TTCGTGATGG CATACGTGAA CGTGGCGCTC
ACGCCGGACG GCGGCGGCTC ATGGCACATC GCACGCTTCC TGCCGCGCCC GTTGGCGAGC
GAAATCATCA TGCTCGGCAA GCCTGTCAGC GCAGAGCGGC TGGCGCACTT CGGGCTCATC
AATGAGGTGG TCAAACCCGG CGAGGCGCTG GACCAGGCAG TGGCACTGGC GGAAAAACTC
GCTGCGCAAT CGCCGCACGC GGTGGGCCGC ATCAAGGGCC TGATCGCGCA CGCAGAAGAC
GCCTCACTGC ACGACCACCT CAAGGCCGAG CAGCACAGCT TTGTCGAAGC GCTGCACCAC
GCCGATGGCA ACGAGGGCAT CTCCGCCTTC CTGCAAAAGC GCAAACCCCA ATACCGCTAG
 
Protein sequence
MTAQLLSKRI GSTLVLTLSN PDARNALDPV MYTASMEALD RAANDNEIRA VIFTGDGNAF 
CAGGNLNRLL ENRSKPRSVQ EEGIDALNQW IETIRTFPKP VIAAVEGPAA GAGFSLVLAC
DFAIAASDAN FVMAYVNVAL TPDGGGSWHI ARFLPRPLAS EIIMLGKPVS AERLAHFGLI
NEVVKPGEAL DQAVALAEKL AAQSPHAVGR IKGLIAHAED ASLHDHLKAE QHSFVEALHH
ADGNEGISAF LQKRKPQYR