Gene Rpic12D_1836 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic12D_1836 
Symbol 
ID8019492 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12D 
KingdomBacteria 
Replicon accessionNC_012856 
Strand
Start bp1955109 
End bp1956320 
Gene Length1212 bp 
Protein Length403 aa 
Translation table11 
GC content65% 
IMG OID644830619 
Producthypothetical protein 
Protein accessionYP_002981789 
Protein GI241663429 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value0.367512 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCAGGAT TCCGCTCCAA GGCTCCCCAA CGTCTTTCCC CCGATGCAGA ACGGCTGGTG 
GCCGATGCGC TGGCGCTGGA CGCGTCGGGC AGTCGCATCG AAGACGTCTA TTGGGAACAA
AGGCTGTCCG AACGTCTTTC CCGGCTGCTC AAGAACGGCA GCCAGACCGC GCTCGACGCC
GCGCTAGATC ATCTTTTCAA GCACAACGAG GAAGCCTCCG ACGTGCTGGC CGAGCAGGCC
GAGACACTGG CTGAATCGGC CATCCTCAGC TCGGGCGGCG TCGAATATGA CGCGCTGCTG
ATCGCAGCGC CCATCCTGGC ACACACACGC TACATGATCC CGTCGGGCAC CATCAAGCCC
GAGATGGCGC AAACGCTGCA GGTACACCTG CAGGCCCACG TGATGGCTTC CAACGCCCGC
GTGGCACTCG CGCCGTACCT GTACAGCATT GACCAGTTGC CGCGCACCCA TTCCGACACG
TTTGCGCTCA CGCACAAGCT GGCCGCCTAT GCGCTGGCCG GGCAGCCGGC AAAGGTCGAA
TTGCGTGACA TGCCCGAGAC GGCACCGATC CTGGCCGATC CTCGCTACCT GGTAGCGATC
GTCGTGGCCC AGCACGGCCA GGCGCTGTTT CGCTGGCAGG AAGACTCCAA GGAGCACCAC
GCCGAGCGTT CCGCCTGCCT GGAGCAATGG CGCGAGCAGG TCACGCCGAC CATCTCCACG
CTGATGCCGG GCTGCGAGTT CGACCTGCTG CTGCCCGACG CCTTCTTCCT GTCCTGCCGC
GAGTCCGACA AGCAGATCCG CCCGCTGACC GTGCGTGCTG CCGTCAATTA CCTGCAGGGC
GCGCTCGACA TGCCGGCCAA CCGCTTCGGC GCCATCATCG GCGCATTCGG CGAAGAACAG
ATCGAGGAAT ACCGCGTGGC CTTCACGGTG CGCGGTGAGA AAGACCTCAT CTACGGCATC
GTCTGGCCTG TCTACGGCCG CGACGGTGGC GCCACGGATG TCGCCGCAGA AGGTGAACCG
GGCAGCCCGC TGGAGCAGAT CTGCGATGAG CTGCGCGCCT GCGGCATCGA AGATATCTTC
CGCCACGGTC AGCTTTTCGA ACCCGAGTAC TGCGAAGACT GCGGGGCCCC GCTCTACGCA
GACCGCTCGG CCGAAATCGT CCACGCAGAA ATGCCGGAAG ACGCACCGAC CCAGCAGCCG
CTGTTCCACT GA
 
Protein sequence
MAGFRSKAPQ RLSPDAERLV ADALALDASG SRIEDVYWEQ RLSERLSRLL KNGSQTALDA 
ALDHLFKHNE EASDVLAEQA ETLAESAILS SGGVEYDALL IAAPILAHTR YMIPSGTIKP
EMAQTLQVHL QAHVMASNAR VALAPYLYSI DQLPRTHSDT FALTHKLAAY ALAGQPAKVE
LRDMPETAPI LADPRYLVAI VVAQHGQALF RWQEDSKEHH AERSACLEQW REQVTPTIST
LMPGCEFDLL LPDAFFLSCR ESDKQIRPLT VRAAVNYLQG ALDMPANRFG AIIGAFGEEQ
IEEYRVAFTV RGEKDLIYGI VWPVYGRDGG ATDVAAEGEP GSPLEQICDE LRACGIEDIF
RHGQLFEPEY CEDCGAPLYA DRSAEIVHAE MPEDAPTQQP LFH