Gene Rpic12D_1832 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic12D_1832 
Symbol 
ID8019488 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12D 
KingdomBacteria 
Replicon accessionNC_012856 
Strand
Start bp1950753 
End bp1951295 
Gene Length543 bp 
Protein Length180 aa 
Translation table11 
GC content66% 
IMG OID644830616 
Productsignal peptide protein 
Protein accessionYP_002981786 
Protein GI241663426 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.830252 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value0.442369 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACAAAT TCATCGTGGG CGCCTGTGCC GGCGTTCTTT CGCTGGCTGC ATCGCAATAT 
GCAACCGCCC AGACCGCGCC CGCAAAGCCG GCCGCCAAAA AGGCTCCGGC CAAGAAGAAG
GCCACCAAGA AGGCAGAGCC TGTTGCAGCC GCCAAGCCTG AAGGCGTGCA ATGGAAGTGC
GAACTTGGCA ACGAACTCTA CATTGCAGGT GACATGACGC GCGACCAGAT CATCAAGCTG
CACTGGAAGG GCAAGAACTA CGACCTGCCG CGCCAACTGA CCCGCACCGG CGCCGACCGC
TACTTCGACC AGAAGACCGG CTTCGACCTG GTCGTGATCC CGGCGAAGGC CATGCTGTTT
GATCGCAACG AAGGCCACCG CCTGGCTGAT GAGTGCCAAA CCGCTGAAAT GGCTGCCGGC
GCACCGGCCC CGACGCAAGC CGGCGCCCTG CGCGCGCCGG CCGGCCTGCC GTTGATGACC
CCGGCCAGCC CGGCCCCCGC ACCGGCCCCG GCACCGGGCA CGGCCCAACC GGCCCAGCAG
TAA
 
Protein sequence
MNKFIVGACA GVLSLAASQY ATAQTAPAKP AAKKAPAKKK ATKKAEPVAA AKPEGVQWKC 
ELGNELYIAG DMTRDQIIKL HWKGKNYDLP RQLTRTGADR YFDQKTGFDL VVIPAKAMLF
DRNEGHRLAD ECQTAEMAAG APAPTQAGAL RAPAGLPLMT PASPAPAPAP APGTAQPAQQ