| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpic12D_1831 |
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| Symbol | prpB |
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| ID | 8019487 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia pickettii 12D |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012856 |
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| Strand | + |
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| Start bp | 1949577 |
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| End bp | 1950473 |
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| Gene Length | 897 bp |
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| Protein Length | 298 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 644830615 |
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| Product | 2-methylisocitrate lyase |
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| Protein accession | YP_002981785 |
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| Protein GI | 241663425 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2513] PEP phosphonomutase and related enzymes |
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| TIGRFAM ID | [TIGR02317] methylisocitrate lyase |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 22 |
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| Fosmid unclonability p-value | 0.464615 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACTGCAC ACACCCAAGC CAGCGCAGGG GCGCGCTTTC GCCAGGCGCT GGTTGAAGAA
TCGCCGCTGC AGGTGGTTGG CACCATCAAC GCCAACCACG CGCTGCTGGC CAAGCGCGCC
GGCTATCGCG CGATCTATCT TTCGGGCGGC GGCGTGGCAG CGGGCTCGCT CGGATTGCCG
GATCTCGGCA TATCGGGCCT GGACGACGTT TTGACGGACG TCCGCCGCAT CACCGATGTG
TGCGATGTAC CGCTGCTGGT CGATGTCGAC ACGGGTTTCG GCGCTTCCGC ATTCAACGTA
GCGCGCACGA CCAAGTCGCT CATCAAGTTT GGCGCCGCGG CCATGCATAT CGAAGACCAA
GTCGGCGCCA AGCGCTGCGG CCATCGACCC AACAAGGAGA TCGTCTCGAA GGAAGAGATG
GTCGACCGGA TCAAAGCGGC CGTCGATGCT CGCACCGACG CCAACTTTGT CATCATGGCC
CGCACCGATG CGCTGGCCGT CGAAGGGTTC GACCGCGCCC TGGAACGGGC CGTGGCCTGC
GTGGAAGCCG GCGCGGACGC GATCTTCCCG GAAGCAATGA CGGAACTCTC GATGTACCGC
AAGTTTGTCG ACGAGGTGAA GGTGCCGGTG CTGGCGAACA TCACCGAATT TGGCCAGACG
CCGCTGTTCA CGCGCGATGA GCTGGCCTCC GCGGGCGTGT CGATGATCCT GTATCCGCTG
TCGGCATTCC GGGCGATGAA CAAGGCTGCG GAGAACGTGT ACGCAGCCAT TCGCCGCGAC
GGCACGCAAC AGAACGTCGT CGACACCATG CAGACGCGCA TGGAACTCTA CGACAGCATC
GGTTACCACG ACTACGAAGC CAAGCTGGAC GCGCTGTTCG CACAGAACCG CGGGTAA
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| Protein sequence | MTAHTQASAG ARFRQALVEE SPLQVVGTIN ANHALLAKRA GYRAIYLSGG GVAAGSLGLP
DLGISGLDDV LTDVRRITDV CDVPLLVDVD TGFGASAFNV ARTTKSLIKF GAAAMHIEDQ
VGAKRCGHRP NKEIVSKEEM VDRIKAAVDA RTDANFVIMA RTDALAVEGF DRALERAVAC
VEAGADAIFP EAMTELSMYR KFVDEVKVPV LANITEFGQT PLFTRDELAS AGVSMILYPL
SAFRAMNKAA ENVYAAIRRD GTQQNVVDTM QTRMELYDSI GYHDYEAKLD ALFAQNRG
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