| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpic12D_1826 |
|---|
| Symbol | |
|---|
| ID | 8019482 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Ralstonia pickettii 12D |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012856 |
|---|
| Strand | - |
|---|
| Start bp | 1945246 |
|---|
| End bp | 1945611 |
|---|
| Gene Length | 366 bp |
|---|
| Protein Length | 121 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 58% |
|---|
| IMG OID | 644830610 |
|---|
| Product | succinate dehydrogenase, hydrophobic membrane anchor protein |
|---|
| Protein accession | YP_002981780 |
|---|
| Protein GI | 241663420 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG2142] Succinate dehydrogenase, hydrophobic anchor subunit |
|---|
| TIGRFAM ID | [TIGR02968] succinate dehydrogenase, hydrophobic membrane anchor protein |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 0.477601 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 22 |
|---|
| Fosmid unclonability p-value | 0.461961 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCAAATA ACAATATCGG TCCCAAGCGC CTCGTCGTCG GCGCGCACTA CGGTCTGAAG
GACTTCCTCG CGCAGCGTGT CACCGCGGTG ATCATGGCGG TCTACACCAT CGTGTTGCTG
GCTGCATTCC TGCTCTCGAA AGACACGTCG TACCAAAGCT GGGCGGGGCT GTTCTCCAAC
CAGTGGATGA AGATGCTGAC GTTCCTGGCG TTCGTGTCGC TCACGTATCA CGCCTGGATC
GGTGTGCGTG ACATCTGGAT GGACTACGTG AAGCCCGTGG CAGTGCGTTT GACGCTGCAA
GTGTTGACGA TTCTGTGGCT CGTCGGTTGT GCGGGCTACG CAGCTCAGAT TCTCTGGAGG
GTTTAA
|
|---|
| Protein sequence | MANNNIGPKR LVVGAHYGLK DFLAQRVTAV IMAVYTIVLL AAFLLSKDTS YQSWAGLFSN
QWMKMLTFLA FVSLTYHAWI GVRDIWMDYV KPVAVRLTLQ VLTILWLVGC AGYAAQILWR
V
|
|---|
| |