| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpic12D_1816 |
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| Symbol | |
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| ID | 8019472 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia pickettii 12D |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012856 |
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| Strand | - |
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| Start bp | 1932814 |
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| End bp | 1935723 |
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| Gene Length | 2910 bp |
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| Protein Length | 969 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 644830600 |
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| Product | hypothetical protein |
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| Protein accession | YP_002981770 |
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| Protein GI | 241663410 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG3170] Tfp pilus assembly protein FimV |
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| TIGRFAM ID | [TIGR03504] FimV C-terminal domain
[TIGR03505] FimV N-terminal domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 24 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGAGGGTGA GCCAATACCG CCGGAGAGAA TCGTCCCATC GCAGTCCTCG CTGGTCGGCC
GTCGCGTTTG CCGCGGCGAG CCTGCTGCTG ATTCAGCCCG CTGCGCAAGC GGCCGGTTTC
GGCGCGCTGC ATGTGCGTTC CAGCCTCGGC CAGCCGCTGC AGGCCGAAAT CGATCTGACC
GGCGTGACGC CCGAAGAGGC ACAAAACCTG GTCGCCAAGC TGGCTGCGCC GGATGCCTAT
TCGCGTGCCG GACTGACCTA CAACCCGATC GTCTCCTCGC TGCGTGCCTC GCTGGAACGC
CAGTCGAGCG GCAATTACGT GGTGCGTCTG CGCTCGACGC AGCCCGTCGC AGAGCCGTTC
GTTGATGTTC TGGTCGACTT GAACTGGGCA AGCGGCCACG TTTCGCGCGC TTATACGTTC
CTGCTGGACC CGGTGGGCTC CAGCAATACC GCACAGAATT TTGCGCCGAC GCCGGTGGTG
CAGGCCACGA CGCCGGGCGC CGTTGAGTCG GCGCCGGCTG CTTCGGCTGC CCAACCGCAA
GCGGCTGCTC CGGCCGCTGC CGCGCCGGCA CCGTCGCGCC AGCCTCGCGC CGCTCGCCAA
ACCGCGCGTG CCCAGCAAGC TGCTCCTGCT GCCGCTGCGC CGGACGCTAC ACCTGGTGGC
TCATACACCG TGCAACGCGG CGATAGCCTG TATGACGTGG CATCGACGGC CGCGCAAGGT
CAGGACGCCG TGTCGCTCGA CCAGATGCTG CTGGCGCTGT ATCGCAACAA CCCCAACGCT
TTCATTGGCG GCAACATCAA CCGGCTGCGT ACCGGCTCGG TGCTGAAGGT GCCGTCGCAG
GCGGAGGCGC AGAAAACGCC GGCGCGCGAA GCCCGCCGCG AAGTCATCGC GCAGACGTCC
GGCTTTGCCG GCTACCGCAA CCGCCTCGCA ACGGCGGCTG AGGCCAACGC AGCGACGGAT
ACCGACTCCG CCCGCCAACA GAGCGGCAGT GTGTCGGCCC GTGTGCAAGA TCAAGCCACG
CCGGCTGCCA GCGGCCGTGA CGAACTGCGT CTCTCCAAGG CCGACCGCGC AGGCAAGGCC
GGTGCGGCCG CGGCTCGCGA TGAGGAACTC GTCGCCAAGG AGCGTGCGCT CAAGGAAATG
GAATCACGCG TTGCACAGTT GCAGAAGAAT CTCTCCGACA TGCAGCGCCT GGTTGAATTG
AAGAACGCTG AACTGGCCAA GGCAGCCAGT GCTGCCAAGC CGGCCGCTGG TGCTGCGCCG
TCGACGGCCG CGCCGGCAGT GGCCGCGGCC AATGCGCCGG CACCGGCGGC TGCGTCTGCC
CCGGCTCCTG TTGCAGGGGT TCCGGCGGAA ACGGCGGCTG CTGCCCCGGC TTCGTCGGCG
ACGGCTGCTG CGGCGGCTTC CGCACCGGAG GCCGCATCGG CGACTGTGGC TGCAGCCTCG
GCTCCGCAAG CAACTGCCAA TGCACCGGTA GTAGCTGCTG CGTCGGCTCC GGCTGCCGCG
CCGAAGAAGG CGCCGGTGGT TGTGGCCCCG CCTCCCCCGG TTCAAGAAGA ATCGTTCCTT
TCGTCGCTGC TGGGCAACCC GATGGCCCTG GGTCTGGGCG GCTTGGTGAT CGCGCTGCTG
GGTGGTCTGG TGGTGTATCG CCGTCGCCAG CAGAAACCTG AGCAGGCACA TGGCTTCCAG
GACAGCCTGT TGTCACAGGA AAGCACTGTG ATGGCGGGCG CCAACTCTCT GTTTGGTGCG
GCCGGCGGTC AAAGCGTCGA CACCTCGCAG CACAGCGTGT TCGGTGCGGA TTTCCGCATT
GGCGGCGGCA ACGAGAGCAA TGAAGTCGAC CCGATTGCTG AGGCCGATGT CTACATCGCC
TACGGCCGCG ACGTGCAAGC CGAAGAAATC CTGCGCGAGG CACTGGAGCA ACATCCGGAG
CGCCAAGCCA TTCGCCTGAA GTTGATGGAA ATTTACGCCA ATCGTCAGGA TGCCCACGGC
TTCCAGACCA TTGCTGAAGA GATGCTGGCG CAAGTTGGCG CGGCCTCGCC TGAATGGGCA
GAGGCTGCCG CAATGGGCCG CAAGTTCGAT CCGGCCAACC CGCTGTATCT GACGGTGCAG
GGTGATGGAC ACCATCCCGG TGCCGAAGCG CATGCTGAAC CGAGCCACTC AGGTGCCGCA
GTCGCAGGTG CGGCTGCGCT GGCAGGTGTG GGTGCCGCGG TGGCCGCCGA GGCCTTCAGC
CCAACGATGA CGGGCCAGAC CACCCGTCGC GGTGACGACT GGACCACGCT GTCTCCGGAT
CTGGATCCGT CCGCGCCGTC GACCAAGGCA CCGCAACTGG CCGATTTCGA TCTGCCGCTG
GAGTCGTTCC CGGCGCCGGC GGCAGGCGAG CCGATCACTG CGCCCGAAGA GGCTTCGGAC
ATCTTCAAGG TGCATGCCGA ACCTGAAGCG GATCTGCCGC AGTTCAACGC GCACGCTGGC
GAGGCTTATC AGCCCGTTGC CGCGCCCCCG CTGCATATGG ATCTGTCGGA CTTGTCGCTG
GATCTGAACC CGACGCCGCC TGCTGCAGAA ACGGCTGCTC CTGCAGCCTC GGTTGCCGCA
GAGGACAGCC TGCCGAGCTG GGCCCAGCCA ACCGACCTGT CGCAGGCCCC GATGCACTTC
GAATCCGAGC CGCATCACGC AGAGCACGCT GAAGTCGCCA ACGACGAACC GCAATCGGCC
ATCCGTCTGG ACACCAACCT GCCGCACACG CTGTCGGGCG AGCATGGCGC CGATGGTGTA
CGCGATCTGC AGATCAAGTT CGATCTGGCC AAGGCTTACA TCGAGATTGG CGACAAGGAA
GGTGCCCGCG AACTGCTGCA GGAAGTGCTG GACCTGGGCG ATCCCTCGTT CCACGCCGAG
GCGCAAGCCT TGATGCGCCA GATCGGCTGA
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| Protein sequence | MRVSQYRRRE SSHRSPRWSA VAFAAASLLL IQPAAQAAGF GALHVRSSLG QPLQAEIDLT
GVTPEEAQNL VAKLAAPDAY SRAGLTYNPI VSSLRASLER QSSGNYVVRL RSTQPVAEPF
VDVLVDLNWA SGHVSRAYTF LLDPVGSSNT AQNFAPTPVV QATTPGAVES APAASAAQPQ
AAAPAAAAPA PSRQPRAARQ TARAQQAAPA AAAPDATPGG SYTVQRGDSL YDVASTAAQG
QDAVSLDQML LALYRNNPNA FIGGNINRLR TGSVLKVPSQ AEAQKTPARE ARREVIAQTS
GFAGYRNRLA TAAEANAATD TDSARQQSGS VSARVQDQAT PAASGRDELR LSKADRAGKA
GAAAARDEEL VAKERALKEM ESRVAQLQKN LSDMQRLVEL KNAELAKAAS AAKPAAGAAP
STAAPAVAAA NAPAPAAASA PAPVAGVPAE TAAAAPASSA TAAAAASAPE AASATVAAAS
APQATANAPV VAAASAPAAA PKKAPVVVAP PPPVQEESFL SSLLGNPMAL GLGGLVIALL
GGLVVYRRRQ QKPEQAHGFQ DSLLSQESTV MAGANSLFGA AGGQSVDTSQ HSVFGADFRI
GGGNESNEVD PIAEADVYIA YGRDVQAEEI LREALEQHPE RQAIRLKLME IYANRQDAHG
FQTIAEEMLA QVGAASPEWA EAAAMGRKFD PANPLYLTVQ GDGHHPGAEA HAEPSHSGAA
VAGAAALAGV GAAVAAEAFS PTMTGQTTRR GDDWTTLSPD LDPSAPSTKA PQLADFDLPL
ESFPAPAAGE PITAPEEASD IFKVHAEPEA DLPQFNAHAG EAYQPVAAPP LHMDLSDLSL
DLNPTPPAAE TAAPAASVAA EDSLPSWAQP TDLSQAPMHF ESEPHHAEHA EVANDEPQSA
IRLDTNLPHT LSGEHGADGV RDLQIKFDLA KAYIEIGDKE GARELLQEVL DLGDPSFHAE
AQALMRQIG
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