Gene Rpic12D_1796 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic12D_1796 
Symbol 
ID8019452 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12D 
KingdomBacteria 
Replicon accessionNC_012856 
Strand
Start bp1917183 
End bp1917596 
Gene Length414 bp 
Protein Length137 aa 
Translation table11 
GC content63% 
IMG OID644830580 
Productprotein of unknown function DUF336 
Protein accessionYP_002981750 
Protein GI241663390 
COG category[R] General function prediction only 
COG ID[COG3193] Uncharacterized protein, possibly involved in utilization of glycolate and propanediol 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.240895 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value0.714082 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAACGA AACCGTGCCT GTGCCAGGAC GATGTCACCA AGATCCTTGA CGCTGCCGAG 
AAAGAAGCGC GCGCGCACCA ATGGAACGTG ACGATTGCCG TGGTGGACGA CGGCGGGCAT
CTGATGGGCC TGCGCCGCAT GGACGGCTGC GCCACCATCT CGGCGTACAT CGCCCCGGAA
AAGGCGCGTA CGGCAGCGCT CGGTCGTCGC GAGTCGAAAA TCTACGAAGA CATCATCAAC
AATGGTCGCA TCTCGTTCCT GTCGGCGCCG CATCTGCAGG GCATGCTCGA GGGCGGTGTG
CCGGTGATGG TGGAAGGCGC GTGTGCCGGT GCAGTGGGCG TGTCAGGCGT GAAGTCGACC
GAGGATGTCG TGATCGCCAA GGCGGGCATT GCCGCGCTGC ACGTGATTTG CTGA
 
Protein sequence
MKTKPCLCQD DVTKILDAAE KEARAHQWNV TIAVVDDGGH LMGLRRMDGC ATISAYIAPE 
KARTAALGRR ESKIYEDIIN NGRISFLSAP HLQGMLEGGV PVMVEGACAG AVGVSGVKST
EDVVIAKAGI AALHVIC