Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rpic12D_1796 |
Symbol | |
ID | 8019452 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia pickettii 12D |
Kingdom | Bacteria |
Replicon accession | NC_012856 |
Strand | - |
Start bp | 1917183 |
End bp | 1917596 |
Gene Length | 414 bp |
Protein Length | 137 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 644830580 |
Product | protein of unknown function DUF336 |
Protein accession | YP_002981750 |
Protein GI | 241663390 |
COG category | [R] General function prediction only |
COG ID | [COG3193] Uncharacterized protein, possibly involved in utilization of glycolate and propanediol |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.240895 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 23 |
Fosmid unclonability p-value | 0.714082 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAAACGA AACCGTGCCT GTGCCAGGAC GATGTCACCA AGATCCTTGA CGCTGCCGAG AAAGAAGCGC GCGCGCACCA ATGGAACGTG ACGATTGCCG TGGTGGACGA CGGCGGGCAT CTGATGGGCC TGCGCCGCAT GGACGGCTGC GCCACCATCT CGGCGTACAT CGCCCCGGAA AAGGCGCGTA CGGCAGCGCT CGGTCGTCGC GAGTCGAAAA TCTACGAAGA CATCATCAAC AATGGTCGCA TCTCGTTCCT GTCGGCGCCG CATCTGCAGG GCATGCTCGA GGGCGGTGTG CCGGTGATGG TGGAAGGCGC GTGTGCCGGT GCAGTGGGCG TGTCAGGCGT GAAGTCGACC GAGGATGTCG TGATCGCCAA GGCGGGCATT GCCGCGCTGC ACGTGATTTG CTGA
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Protein sequence | MKTKPCLCQD DVTKILDAAE KEARAHQWNV TIAVVDDGGH LMGLRRMDGC ATISAYIAPE KARTAALGRR ESKIYEDIIN NGRISFLSAP HLQGMLEGGV PVMVEGACAG AVGVSGVKST EDVVIAKAGI AALHVIC
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