Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rpic12D_1794 |
Symbol | |
ID | 8019450 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia pickettii 12D |
Kingdom | Bacteria |
Replicon accession | NC_012856 |
Strand | + |
Start bp | 1916055 |
End bp | 1916465 |
Gene Length | 411 bp |
Protein Length | 136 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 644830578 |
Product | Biopolymer transport protein ExbD/TolR |
Protein accession | YP_002981748 |
Protein GI | 241663388 |
COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG0848] Biopolymer transport protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.0946301 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 23 |
Fosmid unclonability p-value | 0.726356 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCCTTCG GATCTTTCGA CAACGATGAC GAGGTGATGA GCGAGATCAA CATGACGCCG CTGGTCGACG TCATGCTGGT GCTGCTGATC ATCTTCATCA TCACCATTCC GGTGATCAAC CACGCGGTGA AGATCGACCT GCCGCGCGCG TCCAACAAAC CCGACGACGC CAAGCCACAA AGCGTGAACG TCGAGATCAA CGCAGAAGGC CAGGTGTTCT GGAACAACCA GCCGGTCGAC GAGGCCACGC TGCAAGCCGA CATCGCGCAG GCCGCGCAAC AGCAGCCGCA ACCTGAGATG CACTTGCGCG CAGACCGCAA CGTGCGCTAC GAGCGCGTGG CGCAGGTCAT GGCGTCCATC CAGCGCGGCG GCCTCTCGCG CATCGGCTTT GTAACAGAGC CGCAGCACTA A
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Protein sequence | MSFGSFDNDD EVMSEINMTP LVDVMLVLLI IFIITIPVIN HAVKIDLPRA SNKPDDAKPQ SVNVEINAEG QVFWNNQPVD EATLQADIAQ AAQQQPQPEM HLRADRNVRY ERVAQVMASI QRGGLSRIGF VTEPQH
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