Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rpic12D_1793 |
Symbol | |
ID | 8019449 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia pickettii 12D |
Kingdom | Bacteria |
Replicon accession | NC_012856 |
Strand | + |
Start bp | 1915317 |
End bp | 1916045 |
Gene Length | 729 bp |
Protein Length | 242 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 644830577 |
Product | MotA/TolQ/ExbB proton channel |
Protein accession | YP_002981747 |
Protein GI | 241663387 |
COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG0811] Biopolymer transport proteins |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 21 |
Fosmid unclonability p-value | 0.418463 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCAGGAAC TCGGTCTTTC CCACCTCTGG ACACAAGGCG ACATCGTCAC CCGCGCCACG GCGATTCTGC TGCTCATCAT GTCGCTCGCC TCGTGGATCG TCATCTTCAC CAAGGCGTGG GACATCGTGC GTCTGAAGTC GATGGCACAA GGCGCTGAAA AGCGTTTCTG GCACTCGGAT GATTTCGATC ACGCCATACA GACGCTCGGC TCGCCCAAGG ACAACCCTTT CCACACGCTC GCACAAACGG GCCGGGAAGC GGCGCAGCAT CACCGCGCCA GCCAACCGCA GCTGCATGAT GTGATGGACA TTTCCGACTG GATCACCCGC TCGCTCAAGA GCGCCATCGA TGAGGCCGTG GGGCAAATGC AATCGGGCTT GGCCGTGCTG GCATCGGTCG GCTCGACCGC ACCGTTCGTC GGTCTGTTCG GCACGGTGTG GGGCATCTAT CACGCCCTGC TCGGTATCGG TGCAGTGGGC GTGCCGACCA TCGACAAGGT GGCCGGCCCC GTGGGCGAAT CGCTCATCAT GACCGCCTTC GGCCTGGCTG TGGCCATTCC GGCGGTGCTC GGCTACAACG CCCTCACGCG CGGCAACAAG GCCATCATCG CCAAGCTGAA CCGCTTTGCG CACGACCTGC ACGCCTACTT CGTGACCGGT GCGCGCCTGC GCCCGGGCGC CTCGCGTGAA GACGCCGGCG TGCGCCTGAC TGCTGTCAAG CAGCAGTAA
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Protein sequence | MQELGLSHLW TQGDIVTRAT AILLLIMSLA SWIVIFTKAW DIVRLKSMAQ GAEKRFWHSD DFDHAIQTLG SPKDNPFHTL AQTGREAAQH HRASQPQLHD VMDISDWITR SLKSAIDEAV GQMQSGLAVL ASVGSTAPFV GLFGTVWGIY HALLGIGAVG VPTIDKVAGP VGESLIMTAF GLAVAIPAVL GYNALTRGNK AIIAKLNRFA HDLHAYFVTG ARLRPGASRE DAGVRLTAVK QQ
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