Gene Rpic12D_1787 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic12D_1787 
Symbol 
ID8019443 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12D 
KingdomBacteria 
Replicon accessionNC_012856 
Strand
Start bp1908039 
End bp1908464 
Gene Length426 bp 
Protein Length141 aa 
Translation table11 
GC content65% 
IMG OID644830571 
Producthypothetical protein 
Protein accessionYP_002981741 
Protein GI241663381 
COG category[I] Lipid transport and metabolism 
COG ID[COG3154] Putative lipid carrier protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.017366 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value0.582265 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGCGCC TGCGCCCACC CGAAGTCTTC GTTCGCATGG CGCGCAGCCT ACCGGTGCCG 
CTCACATCGT TCCCCTTTGT GATGGGGCTC GATCTCGCCC GCCGCCTGTC TTGGCTGACG
CCGCCCCCGG AGTTGGACGG GCGGCGCTTT GCCATCACCG TGGAGGACCT GGGCTTGTGC
GCCTGTTTTT GCTGCCGCGG TGGAGCGTTC CACATGTTTT CTGCGTCAAG CTCCGAACCT
GAGCTGGAGT TGCGTGCAGG CATGGGCGAT TTCGTTGCGC TCATTCGCGG CACTGCCGAC
GCGGACACGC TGTTCTTCCA GCGCCGCCTC AAGATTGCGG GGGACACGGA GCTTGGGCTG
ATTGTCAAGA ACTGGCTCGA TGCGGCCGCA CGCCCGGCGT GGCTTGCACG CTGGCAATCG
CGGTAG
 
Protein sequence
MTRLRPPEVF VRMARSLPVP LTSFPFVMGL DLARRLSWLT PPPELDGRRF AITVEDLGLC 
ACFCCRGGAF HMFSASSSEP ELELRAGMGD FVALIRGTAD ADTLFFQRRL KIAGDTELGL
IVKNWLDAAA RPAWLARWQS R